RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 RUBCNLQ9H714 662 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 CDHR5Q9HBB8 845 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 SARS2Q9NP81 518 aaKnown RBP10.44□□□□□ -0.74
LIG1-220ENST00000601091 CHRAC1Q9NRG0 131 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 BAG5Q9UL15 447 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 FZD10Q9ULW2 581 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 CCDC163A0A0D9SF12 145 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 A0A0G2JLL6 359 aaPredicted RBP10.44□□□□□ -0.74
LIG1-220ENST00000601091 HEATR9A2RTY3 570 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 E5RI56 91 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 NDUFS3O75489 264 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 OR6B1O95007 311 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 TOP3BO95985 862 aaKnown RBP10.44□□□□□ -0.74
LIG1-220ENST00000601091 LYNP07948 512 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 FAM58BPP0C7Q3 252 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 RAC2P15153 192 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 CYP2C18P33260 490 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 SCNN1AP37088 669 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 MAPK9P45984 424 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 CAPZA2P47755 286 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 CHN2P52757 468 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 CDK18Q07002 472 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 GALNT1Q10472 559 aaPredicted RBP10.44□□□□□ -0.74
LIG1-220ENST00000601091 PDK3Q15120 406 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 TIFABQ6ZNK6 161 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 PIWIL4Q7Z3Z4 852 aaKnown RBP10.44□□□□□ -0.74
LIG1-220ENST00000601091 PTAR1Q7Z6K3 402 aaPredicted RBP10.44□□□□□ -0.74
LIG1-220ENST00000601091 PRRT2Q7Z6L0 340 aaPredicted RBP10.44□□□□□ -0.74
LIG1-220ENST00000601091 TLK2Q86UE8 772 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 SLC41A1Q8IVJ1 513 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 DCP1BQ8IZD4 617 aaKnown RBP10.44□□□□□ -0.74
LIG1-220ENST00000601091 RIN3Q8TB24 985 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 ZBTB18Q99592 522 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 NUSAP1Q9BXS6 441 aaKnown RBP10.44□□□□□ -0.74
LIG1-220ENST00000601091 ING2Q9H160 280 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 ARNT2Q9HBZ2 717 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 NT5MQ9NPB1 228 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 FAIMQ9NVQ4 179 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 CCDC167Q9P0B6 97 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 DNAJB4Q9UDY4 337 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 FBXO10Q9UK96 956 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 PLA2G4CQ9UP65 541 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 PCDHB12Q9Y5F1 795 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 NHSQ6T4R5 1651 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 HNRNPCL2B2RXH8 293 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 GPR182O15218 404 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 TNFAIP8O95379 198 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 MT-CO1P00395 513 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 HMBSP08397 361 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 SPATA31D3P0C874 917 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 SFTPCP11686 197 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 PSEN2P49810 448 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 MLLT6P55198 1093 aaPredicted RBP10.44□□□□□ -0.74
LIG1-220ENST00000601091 ATP1A4Q13733 1029 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 FASTKQ14296 549 aaKnown RBP10.44□□□□□ -0.74
LIG1-220ENST00000601091 RALGPS1Q5JS13 557 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 STXBP5Q5T5C0 1151 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 MARC1Q5VT66 337 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 NCBP2-AS2Q69YL0 99 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 SPATA31D4Q6ZUB0 917 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 FRA10AC1Q70Z53 315 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 TMPRSS9Q7Z410 1059 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 CRYBG2Q8N1P7 616 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 TUBGCP3Q96CW5 907 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 MNTQ99583 582 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 ZSCAN5AQ9BUG6 496 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 BBS2Q9BXC9 721 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 IGSF9Q9P2J2 1179 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 APPL1Q9UKG1 709 aa10.44□□□□□ -0.74
LIG1-220ENST00000601091 MYOCOSA0A1B0GUC4 107 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 ITM2AO43736 263 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 LTA4HP09960 611 aaKnown RBP10.43□□□□□ -0.74
LIG1-220ENST00000601091 PABPC1P11940 636 aaKnown RBP10.43□□□□□ -0.74
LIG1-220ENST00000601091 EDN3P14138 238 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 UQCRBP14927 111 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 PROZP22891 400 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 ATP5F1P24539 256 aaPredicted RBP10.43□□□□□ -0.74
LIG1-220ENST00000601091 EPHX2P34913 555 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 NUBP1P53384 320 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 RAB10P61026 200 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 RHAGQ02094 409 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 CCDC58Q4VC31 144 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 TAF2Q6P1X5 1199 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 GPR141Q7Z602 305 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 KBTBD2Q8IY47 623 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 UBR7Q8N806 425 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 BHLHE22Q8NFJ8 381 aaPredicted RBP10.43□□□□□ -0.74
LIG1-220ENST00000601091 OR8H1Q8NGG4 311 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 FANK1Q8TC84 345 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 PTCD3Q96EY7 689 aaKnown RBP10.43□□□□□ -0.74
LIG1-220ENST00000601091 LENG8Q96PV6 779 aaPredicted RBP10.43□□□□□ -0.74
LIG1-220ENST00000601091 CITED4Q96RK1 184 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 OMDQ99983 421 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 COLEC11Q9BWP8 271 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 POMKQ9H5K3 350 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 XPR1Q9UBH6 696 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 COL24A1Q17RW2 1714 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 TSPAN4O14817 238 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 ST8SIA5O15466 376 aa10.43□□□□□ -0.74
LIG1-220ENST00000601091 SORBS2O94875 1100 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms