RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 PYGLP06737 847 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 TGM2P21980 687 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 STC1P52823 247 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 SKOR1P84550 965 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 CDK3Q00526 305 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 AP1B1Q10567 949 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 ISXQ2M1V0 245 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 LRRC66Q68CR7 880 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 ADAMTSL4Q6UY14 1074 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 NYAP1Q6ZVC0 841 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 HEATR4Q86WZ0 1026 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 RFX6Q8HWS3 928 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 TMTC1Q8IUR5 882 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 RCOR2Q8IZ40 523 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCDC9-203ENST00000596938 GPR156Q8NFN8 814 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 TADA1Q96BN2 335 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 AP2M1Q96CW1 435 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 SCARF2Q96GP6 870 aaPredicted RBP10.5□□□□□ -0.73
CCDC9-203ENST00000596938 ADGRE3Q9BY15 652 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 FRMD8Q9BZ67 464 aaPredicted RBP10.5□□□□□ -0.73
CCDC9-203ENST00000596938 TMEM168Q9H0V1 697 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 ABCG8Q9H221 673 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 CYP4F12Q9HCS2 524 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 MRPL40Q9NQ50 206 aaKnown RBP10.5□□□□□ -0.73
CCDC9-203ENST00000596938 TRNAU1APQ9NX07 287 aaKnown RBP10.5□□□□□ -0.73
CCDC9-203ENST00000596938 GULP1Q9UBP9 304 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 SLC17A4Q9Y2C5 497 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCDC9-203ENST00000596938 TTLL3Q9Y4R7 772 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 AK5Q9Y6K8 562 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 PLXNB3Q9ULL4 1909 aa10.5□□□□□ -0.73
CCDC9-203ENST00000596938 ANKRD11Q6UB99 2663 aaPredicted RBP10.5□□□□□ -0.73
CCDC9-203ENST00000596938 NBEAQ8NFP9 2946 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 A0A0U1RQS6 177 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 PRSS38A1L453 326 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 RGSL1A5PLK6 1076 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 NDUFA10O95299 355 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 TNNT1P13805 278 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 CD86P42081 329 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 GPR1P46091 355 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 ZBTB17Q13105 803 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 SLC14A2Q15849 920 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 QPCTQ16769 361 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 TEX44Q53QW1 395 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 PERM1Q5SV97 790 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 RAET1GQ6H3X3 334 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 C11orf63Q6NUN7 778 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 NPNTQ6UXI9 565 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 SPOCD1Q6ZMY3 1216 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 RFLNAQ6ZTI6 216 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 TAF8Q7Z7C8 310 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 NT5DC3Q86UY8 548 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 KATNAL2Q8IYT4 538 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 LSMEM2Q8N112 164 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 FAM46DQ8NEK8 389 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 LPCAT1Q8NF37 534 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 EXD1Q8NHP7 514 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 GPBAR1Q8TDU6 330 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 IMP4Q96G21 291 aaKnown RBP10.49□□□□□ -0.73
CCDC9-203ENST00000596938 SMIM14Q96QK8 99 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 MLPHQ9BV36 600 aaPredicted RBP10.49□□□□□ -0.73
CCDC9-203ENST00000596938 SLC25A51Q9H1U9 297 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 APPL1Q9UKG1 709 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 KNTC1P50748 2209 aa10.49□□□□□ -0.73
CCDC9-203ENST00000596938 ITPR1Q14643 2758 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 PTPRBP23467 1997 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 BTNL10A8MVZ5 291 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 NTN3O00634 580 aaPredicted RBP10.48□□□□□ -0.73
CCDC9-203ENST00000596938 MTSS1O43312 755 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 CST8O60676 142 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 USP12O75317 370 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 CSO75390 466 aaKnown RBP10.48□□□□□ -0.73
CCDC9-203ENST00000596938 DXOO77932 396 aaKnown RBP10.48□□□□□ -0.73
CCDC9-203ENST00000596938 CLDN7O95471 211 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 SOD1P00441 154 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 IVLP07476 585 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 PNLIPP16233 465 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 GLB1P16278 677 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 LSSP48449 732 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 DYNLT1P63172 113 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 PRKD1Q15139 912 aaPredicted RBP10.48□□□□□ -0.73
CCDC9-203ENST00000596938 TFDP3Q5H9I0 405 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 IGF2-ASQ6U949 168 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 RBM44Q6ZP01 1051 aaKnown RBP10.48□□□□□ -0.73
CCDC9-203ENST00000596938 GAS2L3Q86XJ1 694 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 NRROSQ86YC3 692 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 KYQ8NBH2 561 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 CCHCR1Q8TD31 782 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 TFB1MQ8WVM0 346 aaKnown RBP10.48□□□□□ -0.73
CCDC9-203ENST00000596938 P3H4Q92791 437 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 FGF11Q92914 225 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 SCAMP4Q969E2 229 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 COX14Q96I36 57 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 HIC2Q96JB3 615 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 TEKT5Q96M29 485 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 AGAP3Q96P47 875 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 TRIB3Q96RU7 358 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 CCDC3Q9BQI4 270 aa10.48□□□□□ -0.73
CCDC9-203ENST00000596938 POLR1BQ9H9Y6 1135 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms