RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 CDKN3Q16667 212 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 LONRF2Q1L5Z9 754 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 CDCP2Q5VXM1 449 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 GUSBP11Q6P575 273 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 DRICH1Q6PGQ1 229 aaPredicted RBP15.71■□□□□ 0.11
USB1-208ENST00000563207 DARS2Q6PI48 645 aaKnown RBP15.71■□□□□ 0.11
USB1-208ENST00000563207 PARGQ86W56 976 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 CAMK1DQ8IU85 385 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 TP53I13Q8NBR0 393 aaPredicted RBP15.71■□□□□ 0.11
USB1-208ENST00000563207 SLC35B2Q8TB61 432 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 ACTRT1Q8TDG2 376 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 SPOCK2Q92563 424 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 RAB7BQ96AH8 199 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 IFT43Q96FT9 208 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 TEKT5Q96M29 485 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 WDR24Q96S15 920 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 CLPBQ9H078 707 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 SEPT10Q9P0V9 454 aa15.71■□□□□ 0.11
USB1-208ENST00000563207 ASXL3Q9C0F0 2248 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 TCRBV7S2A1N4TA0A589 114 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 PMS2P1A4D2B8 440 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 AQP9O43315 295 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 HLA-DQB2P05538 268 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 CDK4P11802 303 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 CA4P22748 312 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 NFKBIAP25963 317 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 PTPN3P26045 913 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 RBL1P28749 1068 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 HNRNPKP61978 463 aaKnown RBP eCLIP15.7■□□□□ 0.1
USB1-208ENST00000563207 WASHC5Q12768 1159 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 ZBTB17Q13105 803 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 IRF4Q15306 451 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 SLC14A2Q15849 920 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 CFAP58Q5T655 872 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 BRAT1Q6PJG6 821 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 DCP2Q8IU60 420 aaKnown RBP15.7■□□□□ 0.1
USB1-208ENST00000563207 IFI44Q8TCB0 444 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 ASB12Q8WXK4 309 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 SEMA3CQ99985 751 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 NRSN2Q9GZP1 204 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 SLC25A51Q9H1U9 297 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 NOD2Q9HC29 1040 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 RNF14Q9UBS8 474 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 SAR1BQ9Y6B6 198 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 LRP4O75096 1905 aa15.7■□□□□ 0.1
USB1-208ENST00000563207 A0A1W2PNU3 283 aaPredicted RBP15.69■□□□□ 0.1
USB1-208ENST00000563207 TSPAN11A1L157 253 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 CPED1A4D0V7 1026 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 PGRMC1O00264 195 aaKnown RBP15.69■□□□□ 0.1
USB1-208ENST00000563207 HTRA2O43464 458 aaPredicted RBP15.69■□□□□ 0.1
USB1-208ENST00000563207 LIASO43766 372 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 TM7SF2O76062 418 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 MPOP05164 745 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 MAXP61244 160 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 E2F1Q01094 437 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 SIX1Q15475 284 aaPredicted RBP15.69■□□□□ 0.1
USB1-208ENST00000563207 TMEM52BQ4KMG9 183 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 PRRT3Q5FWE3 981 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 PERM1Q5SV97 790 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 ZSCAN30Q86W11 494 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 CNTD1Q8N815 330 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 FAM181AQ8N9Y4 354 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 CXorf40AQ8TE69 158 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 LRRN4Q8WUT4 740 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 ECHDC3Q96DC8 303 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 AGAP3Q96P47 875 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 PPP1R2P1Q96PQ5 205 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 LRRC61Q9BV99 259 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 USP29Q9HBJ7 922 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 GLOD4Q9HC38 313 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 PCDH12Q9NPG4 1184 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 DNPEPQ9ULA0 475 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 DRG1Q9Y295 367 aaKnown RBP15.69■□□□□ 0.1
USB1-208ENST00000563207 R3HDM2Q9Y2K5 976 aaKnown RBP15.69■□□□□ 0.1
USB1-208ENST00000563207 TTLL3Q9Y4R7 772 aa15.69■□□□□ 0.1
USB1-208ENST00000563207 SMG1Q96Q15 3661 aaKnown RBP15.69■□□□□ 0.1
USB1-208ENST00000563207 C5orf60A6NFR6 353 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 NEMP2A6NFY4 417 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 A8MX80 341 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 KIF2AO00139 706 aaPredicted RBP15.68■□□□□ 0.1
USB1-208ENST00000563207 TRAFD1O14545 582 aaPredicted RBP15.68■□□□□ 0.1
USB1-208ENST00000563207 KCNN4O15554 427 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 CASQ1P31415 396 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 OASLQ15646 514 aaKnown RBP15.68■□□□□ 0.1
USB1-208ENST00000563207 UGP2Q16851 508 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 WSCD2Q2TBF2 565 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 ITPRIPL1Q6GPH6 555 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 PID1Q7Z2X4 250 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 EFL1Q7Z2Z2 1120 aaKnown RBP15.68■□□□□ 0.1
USB1-208ENST00000563207 PHACTR4Q8IZ21 702 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 ZNF567Q8N184 647 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 C17orf53Q8N3J3 647 aaPredicted RBP15.68■□□□□ 0.1
USB1-208ENST00000563207 PLA2G15Q8NCC3 412 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 DENND6BQ8NEG7 585 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 ARRDC2Q8TBH0 407 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 FAM174AQ8TBP5 190 aa15.68■□□□□ 0.1
USB1-208ENST00000563207 TSACCQ96A04 125 aaPredicted RBP15.68■□□□□ 0.1
USB1-208ENST00000563207 IMP4Q96G21 291 aaKnown RBP15.68■□□□□ 0.1
USB1-208ENST00000563207 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.68■□□□□ 0.1
USB1-208ENST00000563207 KLHL8Q9P2G9 620 aaPredicted RBP15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms