RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 USP17L7P0C7H9 530 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 CCNCP24863 283 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 GRIA3P42263 894 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 ATP4BP51164 291 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 GEMP55040 296 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 PRAMEP78395 509 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 PM20D1Q6GTS8 502 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 KIAA0930Q6ICG6 404 aaPredicted RBP11.49□□□□□ -0.57
DDB1-224ENST00000545894 DCLRE1AQ6PJP8 1040 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 GPRIN1Q7Z2K8 1008 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 RNF135Q8IUD6 432 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 SLC22A9Q8IVM8 553 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 RBM12BQ8IXT5 1001 aaKnown RBP11.49□□□□□ -0.57
DDB1-224ENST00000545894 MFSD2AQ8NA29 543 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 CANT1Q8WVQ1 401 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 ROPN1LQ96C74 230 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 PLGRKTQ9HBL7 147 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 GLOD4Q9HC38 313 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 TREX1Q9NSU2 369 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 PTBP2Q9UKA9 531 aaKnown RBP11.49□□□□□ -0.57
DDB1-224ENST00000545894 MTF2Q9Y483 593 aaPredicted RBP11.49□□□□□ -0.57
DDB1-224ENST00000545894 TRAF6Q9Y4K3 522 aa11.49□□□□□ -0.57
DDB1-224ENST00000545894 HEMK1Q9Y5R4 338 aaPredicted RBP11.49□□□□□ -0.57
DDB1-224ENST00000545894 TRIM64CA6NLI5 447 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 PTGESO14684 152 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 GABRDO14764 452 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 LTA4HP09960 611 aaKnown RBP11.48□□□□□ -0.57
DDB1-224ENST00000545894 ATP6V1B2P21281 511 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 STX1BP61266 288 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 PLOD1Q02809 727 aaPredicted RBP11.48□□□□□ -0.57
DDB1-224ENST00000545894 ZBED5Q49AG3 693 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 RBM20Q5T481 1227 aaKnown RBP11.48□□□□□ -0.57
DDB1-224ENST00000545894 INTS11Q5TA45 600 aaKnown RBP11.48□□□□□ -0.57
DDB1-224ENST00000545894 KIAA0319Q5VV43 1072 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 NEPROQ6NW34 567 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 ARHGAP36Q6ZRI8 547 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 KIAA0408Q6ZU52 694 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 RPS27LQ71UM5 84 aaKnown RBP11.48□□□□□ -0.57
DDB1-224ENST00000545894 CAMK1DQ8IU85 385 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 LRRC43Q8N309 656 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 BBS5Q8N3I7 341 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 ATPAF2Q8N5M1 289 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 SNX31Q8N9S9 440 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 PCYOX1LQ8NBM8 494 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 TNIP2Q8NFZ5 429 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 OR9I1Q8NGQ6 314 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 EDEM1Q92611 657 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 ZUFSPQ96AP4 578 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 CASD1Q96PB1 797 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 SMOQ99835 787 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 OSBPL6Q9BZF3 934 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 CRTAC1Q9NQ79 661 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 ENTPD7Q9NQZ7 604 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 CCM2LQ9NUG4 571 aaPredicted RBP11.48□□□□□ -0.57
DDB1-224ENST00000545894 SAC3D1A6NKF1 404 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 BBIP1A8MTZ0 92 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 ZNF701M0R085 212 aaPredicted RBP11.48□□□□□ -0.57
DDB1-224ENST00000545894 AURKAO14965 403 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 FAM163BP0C2L3 166 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 MYF6P23409 242 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 YWHAQP27348 245 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 ADRA1AP35348 466 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 SCNN1GP51170 649 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 PLK1P53350 603 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 NME5P56597 212 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 SEPT6Q14141 434 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 EML3Q32P44 896 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 RAB41Q5JT25 222 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 RWDD4Q6NW29 188 aaKnown RBP11.48□□□□□ -0.57
DDB1-224ENST00000545894 TTC33Q6PID6 262 aaPredicted RBP11.48□□□□□ -0.57
DDB1-224ENST00000545894 LARP4Q71RC2 724 aaKnown RBP eCLIP11.48□□□□□ -0.574e-6■□□□□ 9
DDB1-224ENST00000545894 FAM35AQ86V20 835 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 CLVS1Q8IUQ0 354 aaPredicted RBP11.48□□□□□ -0.57
DDB1-224ENST00000545894 ZNF786Q8N393 782 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 PHF21BQ96EK2 531 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 HSPBAP1Q96EW2 488 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 TSPAN17Q96FV3 270 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 PPP1R2P1Q96PQ5 205 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 IL12RB2Q99665 862 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 OLFM1Q99784 485 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 SLC39A3Q9BRY0 314 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 TRMOQ9BU70 441 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 FSD1LQ9BXM9 530 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 PRKD2Q9BZL6 878 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 TRIM15Q9C019 465 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 ZNHIT2Q9UHR6 403 aa11.48□□□□□ -0.57
DDB1-224ENST00000545894 AQP12BA6NM10 295 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 INPPL1O15357 1258 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 POMCP01189 267 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 BMP8BP34820 402 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 STT3AP46977 705 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 CLCN5P51795 746 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 ACAP2Q15057 778 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 PITRM1Q5JRX3 1037 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 TBCELQ5QJ74 424 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 DUS1LQ6P1R4 473 aaKnown RBP11.47□□□□□ -0.57
DDB1-224ENST00000545894 GLB1LQ6UWU2 654 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 ZNF554Q86TJ5 538 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 GPR180Q86V85 440 aa11.47□□□□□ -0.57
DDB1-224ENST00000545894 AQP12AQ8IXF9 295 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms