RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 RENBPP51606 427 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 UBASH3AP57075 661 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 MAXP61244 160 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 ZBED6P86452 979 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 ZFP36L1Q07352 338 aaKnown RBP11.88□□□□□ -0.51
GABPB1-206ENST00000543881 MMRN1Q13201 1228 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 DTX1Q86Y01 620 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 CCNJLQ8IV13 435 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 SFTPA2Q8IWL1 248 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 OR6C4Q8NGE1 309 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 TEKT4Q8WW24 435 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 SPOCK2Q92563 424 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 USP7Q93009 1102 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 TMEM159Q96B96 161 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 COQ10AQ96MF6 247 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 WDR92Q96MX6 357 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 NUDCD1Q96RS6 583 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 RBM15Q96T37 977 aaKnown RBP eCLIP11.88□□□□□ -0.517e-13■■■■■ 35
GABPB1-206ENST00000543881 CMKLR1Q99788 373 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 NUP85Q9BW27 656 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 LGR4Q9BXB1 951 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 NOD2Q9HC29 1040 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 FGF22Q9HCT0 170 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 MRPL40Q9NQ50 206 aaKnown RBP11.88□□□□□ -0.51
GABPB1-206ENST00000543881 KLQ9UEF7 1012 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 ANAPC7Q9UJX3 599 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 BZW2Q9Y6E2 419 aaKnown RBP11.88□□□□□ -0.51
GABPB1-206ENST00000543881 FLNCQ14315 2725 aa11.87□□□□□ -0.51
GABPB1-206ENST00000543881 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.87□□□□□ -0.51
GABPB1-206ENST00000543881 C9orf172C9J069 976 aa11.87□□□□□ -0.51
GABPB1-206ENST00000543881 GYPCP04921 128 aa11.87□□□□□ -0.51
GABPB1-206ENST00000543881 MAPK10P53779 464 aa11.87□□□□□ -0.51
GABPB1-206ENST00000543881 KIAA1024LP59773 190 aa11.87□□□□□ -0.51
GABPB1-206ENST00000543881 POLR2LP62875 67 aaKnown RBP11.87□□□□□ -0.51
GABPB1-206ENST00000543881 TRAF2Q12933 501 aa11.87□□□□□ -0.51
GABPB1-206ENST00000543881 ZNF235Q14590 738 aa11.87□□□□□ -0.51
GABPB1-206ENST00000543881 GKN2Q86XP6 184 aa11.87□□□□□ -0.51
GABPB1-206ENST00000543881 PTRH1Q86Y79 214 aaKnown RBP11.87□□□□□ -0.51
GABPB1-206ENST00000543881 CBARPQ8N350 705 aaPredicted RBP11.87□□□□□ -0.51
GABPB1-206ENST00000543881 Q8N9G6 341 aaPredicted RBP11.87□□□□□ -0.51
GABPB1-206ENST00000543881 MGME1Q9BQP7 344 aa11.87□□□□□ -0.51
GABPB1-206ENST00000543881 ADNPQ9H2P0 1102 aa11.87□□□□□ -0.51
GABPB1-206ENST00000543881 IP6K2Q9UHH9 426 aa11.87□□□□□ -0.51
GABPB1-206ENST00000543881 NENFQ9UMX5 172 aa11.87□□□□□ -0.51
GABPB1-206ENST00000543881 DGKBQ9Y6T7 804 aa11.87□□□□□ -0.51
GABPB1-206ENST00000543881 ZFC3H1O60293 1989 aaKnown RBP11.86□□□□□ -0.51
GABPB1-206ENST00000543881 SOCS5O75159 536 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 TNFP01375 233 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 LHCGRP22888 699 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 CD82P27701 267 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 ARSEP51690 589 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 IHHQ14623 411 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 ACOX1Q15067 660 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 NFKBIBQ15653 356 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 CNGA3Q16281 694 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 SKIDA1Q1XH10 827 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 ATP13A4Q4VNC1 1196 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 PNCKQ6P2M8 343 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 ALKBH5Q6P6C2 394 aaKnown RBP11.86□□□□□ -0.51
GABPB1-206ENST00000543881 PAF1Q8N7H5 531 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 OR56A4Q8NGH8 313 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 CCL4L1Q8NHW4 92 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 ZNF564Q8TBZ8 553 aaPredicted RBP11.86□□□□□ -0.51
GABPB1-206ENST00000543881 FAM71BQ8TC56 605 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 PDCD6IPQ8WUM4 868 aaKnown RBP11.86□□□□□ -0.51
GABPB1-206ENST00000543881 EPN3Q9H201 632 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 IFNKQ9P0W0 207 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 APPL1Q9UKG1 709 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 RNF215Q9Y6U7 377 aa11.86□□□□□ -0.51
GABPB1-206ENST00000543881 A0A0U1RQS6 177 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 NPIPB15A6NHN6 443 aaPredicted RBP11.85□□□□□ -0.51
GABPB1-206ENST00000543881 CACNB4O00305 520 aaPredicted RBP11.85□□□□□ -0.51
GABPB1-206ENST00000543881 HEXIM1O94992 359 aaKnown RBP11.85□□□□□ -0.51
GABPB1-206ENST00000543881 CPP00450 1065 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 FUCA1P04066 466 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 HOXC4P09017 264 aaPredicted RBP11.85□□□□□ -0.51
GABPB1-206ENST00000543881 GLB1P16278 677 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 VIPR1P32241 457 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 HSPA9P38646 679 aaKnown RBP11.85□□□□□ -0.51
GABPB1-206ENST00000543881 MMP13P45452 471 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 CDH6P55285 790 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 TPM4P67936 248 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 FOXK1P85037 733 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 CCDC122Q5T0U0 273 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 MARC1Q5VT66 337 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 BORAQ6PGQ7 559 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 OGFOD3Q6PK18 319 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 HSD11B1LQ7Z5J1 315 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 ATPAF2Q8N5M1 289 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 TEX26Q8N6G2 289 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 GPR156Q8NFN8 814 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 ATL2Q8NHH9 583 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 PTCD2Q8WV60 388 aaKnown RBP11.85□□□□□ -0.51
GABPB1-206ENST00000543881 JPH3Q8WXH2 748 aaPredicted RBP11.85□□□□□ -0.51
GABPB1-206ENST00000543881 SMIM14Q96QK8 99 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 SLC12A9Q9BXP2 914 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 TMEM168Q9H0V1 697 aa11.85□□□□□ -0.51
GABPB1-206ENST00000543881 LUC7L2Q9Y383 392 aaKnown RBP11.85□□□□□ -0.51
GABPB1-206ENST00000543881 CLEC18AA5D8T8 446 aa11.84□□□□□ -0.51
GABPB1-206ENST00000543881 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms