RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 TTI2Q6NXR4 508 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 SYNE3Q6ZMZ3 975 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 RAB11FIP2Q7L804 512 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 SYTL1Q8IYJ3 562 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 FGFRL1Q8N441 504 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 Q8N7P7 452 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 LSM14AQ8ND56 463 aaKnown RBP0.75□□□□□ -2.29
COPB1-212ENST00000534771 GJC3Q8NFK1 279 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 OR2L2Q8NH16 312 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 PIGTQ969N2 578 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 C3orf49Q96BT1 292 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 LINGO1Q96FE5 620 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 ZC3HAV1LQ96H79 300 aaKnown RBP0.75□□□□□ -2.29
COPB1-212ENST00000534771 GPATCH3Q96I76 525 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 CMKLR1Q99788 373 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 PKP2Q99959 881 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 SYT15Q9BQS2 421 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 PIGQQ9BRB3 760 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 RTKNQ9BST9 563 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP0.75□□□□□ -2.29
COPB1-212ENST00000534771 NPLQ9BXD5 320 aaPredicted RBP0.75□□□□□ -2.29
COPB1-212ENST00000534771 FGFBP2Q9BYJ0 223 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 STK33Q9BYT3 514 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 CHST12Q9NRB3 414 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 SMYD2Q9NRG4 433 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 ATAD3AQ9NVI7 634 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 GPR83Q9NYM4 423 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 NDUFAF4Q9P032 175 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 CHPF2Q9P2E5 772 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 MAN1B1Q9UKM7 699 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 KLK13Q9UKR3 277 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 RARRES3Q9UL19 164 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 ACSL5Q9ULC5 683 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 CELA1Q9UNI1 258 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 C19orf53Q9UNZ5 99 aaPredicted RBP0.75□□□□□ -2.29
COPB1-212ENST00000534771 THRAP3Q9Y2W1 955 aaKnown RBP0.75□□□□□ -2.29
COPB1-212ENST00000534771 MOB4Q9Y3A3 225 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 PYGO1Q9Y3Y4 419 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 LOXL2Q9Y4K0 774 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 KIAA1210Q9ULL0 1709 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 AGRNO00468 2067 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 A0A0U1RQF3 1178 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 ARHGAP10A1A4S6 786 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 FAM90A20PA6NIJ5 464 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 SLCO1B7G3V0H7 640 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 NCAM2O15394 837 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 FFAR2O15552 330 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 PI15O43692 258 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 ZFAND5O76080 213 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 MOCS3O95396 460 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 EML2O95834 649 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 ITGA2BP08514 1039 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 FRMD6-AS1P0C7T7 363 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 TRIM49P0CI25 452 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 TRIM49CP0CI26 452 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 TNNT1P13805 278 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 ZNF23P17027 643 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 PTPN2P17706 415 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 DDX5P17844 614 aaKnown RBP0.74□□□□□ -2.29
COPB1-212ENST00000534771 BDKRB2P30411 391 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 HNF1BP35680 557 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 EIF2S3P41091 472 aaKnown RBP0.74□□□□□ -2.29
COPB1-212ENST00000534771 ARCN1P48444 511 aaKnown RBP0.74□□□□□ -2.29
COPB1-212ENST00000534771 NR2C2P49116 596 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 METAP2P50579 478 aaKnown RBP eCLIP0.74□□□□□ -2.29
COPB1-212ENST00000534771 HNRNPH2P55795 449 aaKnown RBP0.74□□□□□ -2.29
COPB1-212ENST00000534771 AP2B1P63010 937 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 YWHAZP63104 245 aaKnown RBP0.74□□□□□ -2.29
COPB1-212ENST00000534771 IGBP1P78318 339 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 SPOCK1Q08629 439 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 GOLGA8FQ08AF8 430 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 RAPSNQ13702 412 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 THOC5Q13769 683 aaKnown RBP0.74□□□□□ -2.29
COPB1-212ENST00000534771 PTK2BQ14289 1009 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 CAPRIN1Q14444 709 aaKnown RBP0.74□□□□□ -2.29
COPB1-212ENST00000534771 SPARCL1Q14515 664 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 SLC18A3Q16572 532 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 COBLL1Q53SF7 1204 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 FFAR4Q5NUL3 377 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 SH2D4BQ5SQS7 431 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 ADAMTSL4-AS1Q5T5F5 129 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 TTC22Q5TAA0 569 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 IZUMO3Q5VZ72 239 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 BHLHB9Q6PI77 547 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 C14orf80Q86SX3 495 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 TBC1D26Q86UD7 250 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 KRTAP11-1Q8IUC1 163 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 SLC44A2Q8IWA5 706 aaPredicted RBP0.74□□□□□ -2.29
COPB1-212ENST00000534771 SLC39A11Q8N1S5 342 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 ZNF611Q8N823 705 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 OR52I2Q8NH67 350 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 SCAMP5Q8TAC9 235 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 TTC8Q8TAM2 541 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 FAM71BQ8TC56 605 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 GDPD5Q8WTR4 605 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 STYXQ8WUJ0 223 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 TIFAQ96CG3 184 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 EID2BQ96D98 161 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 OMA1Q96E52 524 aa0.74□□□□□ -2.29
COPB1-212ENST00000534771 SENP5Q96HI0 755 aaPredicted RBP0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms