RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 POLR3BQ9NW08 1133 aaPredicted RBP15.92■□□□□ 0.14
ATP2C1-224ENST00000533801 CD274Q9NZQ7 290 aa15.92■□□□□ 0.14
ATP2C1-224ENST00000533801 NYNRINQ9P2P1 1898 aaKnown RBP15.92■□□□□ 0.14
ATP2C1-224ENST00000533801 GIPC1O14908 333 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 H2AFYO75367 372 aaKnown RBP15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 RPP40O75818 363 aaKnown RBP15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 ZNF189O75820 626 aaPredicted RBP15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 STC2O76061 302 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 MAGEA11P43364 429 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 PIK3CGP48736 1102 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 DSG1Q02413 1049 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 ZNF33AQ06730 810 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 TRIM60Q495X7 471 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 OTOP2Q7RTS6 562 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 EML4Q9HC35 981 aaKnown RBP15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 ADAMTS6Q9UKP5 1117 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 SDHDO14521 159 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 INSIG1O15503 277 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 CACNG3O60359 315 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 TRIM16O95361 564 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 NDST3O95803 873 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 FGF1P05230 155 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 HOXD9P28356 352 aaPredicted RBP15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 EEF1DP29692 281 aaKnown RBP15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 TUFMP49411 452 aaKnown RBP15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 ELAVL2Q12926 359 aaKnown RBP15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 POM121L1PQ3SYA9 428 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 FUT11Q495W5 492 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 SGO1Q5FBB7 561 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 LRRC49Q8IUZ0 686 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 FAM126BQ8IXS8 530 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 PIANPQ8IYJ0 282 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 ZNF683Q8IZ20 524 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 DPPA5A6NC42 116 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 CAPN8A6NHC0 703 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 ENO4A6NNW6 628 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 TMCC1O94876 653 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 LEPRP48357 1165 aaKnown RBP15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 CREB5Q02930 508 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 SCML4Q8N228 414 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 CLDN19Q8N6F1 224 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 MDGA1Q8NFP4 955 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 EBF3Q9H4W6 596 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 EFCAB1Q9HAE3 211 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 EVLQ9UI08 416 aaPredicted RBP15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 SORCS3Q9UPU3 1222 aa15.91■□□□□ 0.14
ATP2C1-224ENST00000533801 TRPC5OSA6NMA1 111 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 PSMD12O00232 456 aaPredicted RBP15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 SLC7A4O43246 635 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 CRTAMO95727 393 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 ARMC12Q5T9G4 340 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 AFMIDQ63HM1 303 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 BEND5Q7L4P6 421 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 ISCA2Q86U28 154 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 CPNE9Q8IYJ1 553 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 RDH11Q8TC12 318 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 BRSK1Q8TDC3 778 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 ISL2Q96A47 359 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 LRGUKQ96M69 825 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 ACOX2Q99424 681 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 MFSD1Q9H3U5 465 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 STN1Q9H668 368 aaKnown RBP15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 YIPF1Q9Y548 306 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 UBFD1O14562 309 aaKnown RBP15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 SNX2O60749 519 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 HLA-DPA1P20036 260 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 AQP4P55087 323 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 CAPRIN1Q14444 709 aaKnown RBP15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 PLA2G4EQ3MJ16 856 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 DHDDSQ86SQ9 333 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 PTCD2Q8WV60 388 aaKnown RBP15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 C3orf30Q96M34 536 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 SERPINI1Q99574 410 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 CLSTN3Q9BQT9 956 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 MIA3Q5JRA6 1907 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 DOCK6Q96HP0 2047 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 A0A1B0GTL3 188 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 PRAMEF12O95522 483 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 YBEYP58557 167 aaPredicted RBP15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 DNAJB7Q7Z6W7 309 aaPredicted RBP15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 CNTN4Q8IWV2 1026 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 FBXO39Q8N4B4 442 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 PPP1R2P1Q96PQ5 205 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 SLC30A3Q99726 388 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 MRPL9Q9BYD2 267 aaKnown RBP15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 ZNF212Q9UDV6 495 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 CPQQ9Y646 472 aa15.9■□□□□ 0.14
ATP2C1-224ENST00000533801 TYW5A2RUC4 315 aaKnown RBP15.89■□□□□ 0.13
ATP2C1-224ENST00000533801 HTR7P34969 479 aa15.89■□□□□ 0.13
ATP2C1-224ENST00000533801 CDC16Q13042 620 aa15.89■□□□□ 0.13
ATP2C1-224ENST00000533801 DBN1Q16643 649 aa15.89■□□□□ 0.13
ATP2C1-224ENST00000533801 C18orf21Q32NC0 220 aaPredicted RBP15.89■□□□□ 0.13
ATP2C1-224ENST00000533801 C16orf89Q6UX73 402 aa15.89■□□□□ 0.13
ATP2C1-224ENST00000533801 PIP4K2CQ8TBX8 421 aa15.89■□□□□ 0.13
ATP2C1-224ENST00000533801 WFDC5Q8TCV5 224 aa15.89■□□□□ 0.13
ATP2C1-224ENST00000533801 CCDC97Q96F63 343 aaPredicted RBP15.89■□□□□ 0.13
ATP2C1-224ENST00000533801 TMEM39AQ9NV64 488 aa15.89■□□□□ 0.13
ATP2C1-224ENST00000533801 SCOCQ9UIL1 159 aa15.89■□□□□ 0.13
ATP2C1-224ENST00000533801 LRRC42Q9Y546 428 aa15.89■□□□□ 0.13
ATP2C1-224ENST00000533801 TMEM189-UBE2V1I3L0A0 370 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms