RNA–Protein interactions for RNA: ENST00000532160.1

VPS26B-207, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-207ENST00000532160 LIASO43766 372 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 LEFTY1O75610 366 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 NEBLO76041 1014 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 PCDH8O95206 1070 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 HLA-DQB2P05538 268 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 CKMT1AP12532 417 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 CCNB1P14635 433 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 HNRNPA2B1P22626 353 aaKnown RBP9.44□□□□□ -0.9
VPS26B-207ENST00000532160 AKT2P31751 481 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 KCNJ1P48048 391 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 GDF10P55107 478 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 RHOAP61586 193 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 E2F1Q01094 437 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 ITKQ08881 620 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 FGL2Q14314 439 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 ZNF235Q14590 738 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 LBRQ14739 615 aaKnown RBP9.44□□□□□ -0.9
VPS26B-207ENST00000532160 PRKD1Q15139 912 aaPredicted RBP9.44□□□□□ -0.9
VPS26B-207ENST00000532160 TMEM259Q4ZIN3 620 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 ARSIQ5FYB1 569 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 TMCO4Q5TGY1 634 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 MARC1Q5VT66 337 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 CDCP2Q5VXM1 449 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 NEK5Q6P3R8 708 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 DARS2Q6PI48 645 aaKnown RBP9.44□□□□□ -0.9
VPS26B-207ENST00000532160 PCSK4Q6UW60 755 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 DPY19L3Q6ZPD9 716 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 ERN2Q76MJ5 926 aaKnown RBP9.44□□□□□ -0.9
VPS26B-207ENST00000532160 BZW1Q7L1Q6 419 aaKnown RBP9.44□□□□□ -0.9
VPS26B-207ENST00000532160 PTAR1Q7Z6K3 402 aaPredicted RBP9.44□□□□□ -0.9
VPS26B-207ENST00000532160 ABI3BPQ7Z7G0 1075 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 SPACA3Q8IXA5 215 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 PRELID2Q8N945 189 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 TMIEQ8NEW7 156 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 SLC35B2Q8TB61 432 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 ACTRT1Q8TDG2 376 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 NSMCE1Q8WV22 266 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 CAVIN3Q969G5 261 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 NSMCE3Q96MG7 304 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 AGAP3Q96P47 875 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 TSGA13Q96PP4 275 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 QKIQ96PU8 341 aaKnown RBP eCLIP9.44□□□□□ -0.9
VPS26B-207ENST00000532160 RUFY1Q96T51 708 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 TMEM121Q9BTD3 319 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 RBM22Q9NW64 420 aaKnown RBP eCLIP9.44□□□□□ -0.9
VPS26B-207ENST00000532160 LHX3Q9UBR4 397 aa9.44□□□□□ -0.9
VPS26B-207ENST00000532160 POM121BA6NF01 834 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 TK2O00142 265 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 KRIT1O00522 736 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 RAD51BO15315 384 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 POLR3GO15318 223 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-207ENST00000532160 PRNPP04156 253 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 MPOP05164 745 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 ETS1P14921 441 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 PTPN3P26045 913 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 ACTN2P35609 894 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 MMP13P45452 471 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 GEMIN4P57678 1058 aaKnown RBP9.43□□□□□ -0.9
VPS26B-207ENST00000532160 SLC20A2Q08357 652 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 C19orf57Q0VDD7 668 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 WASHC5Q12768 1159 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 XRCC4Q13426 336 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 INO80DQ53TQ3 878 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-207ENST00000532160 CARD16Q5EG05 197 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 TIGD7Q6NT04 549 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-207ENST00000532160 C8orf74Q6P047 294 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 TTC27Q6P3X3 843 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 Q6ZSR6 202 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 CROCCP2Q86T23 111 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 LRRC49Q8IUZ0 686 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 CDKL3Q8IVW4 592 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-207ENST00000532160 TAB3Q8N5C8 712 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-207ENST00000532160 CNTD1Q8N815 330 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 FAM71DQ8N9W8 422 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 TTC13Q8NBP0 860 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 NOA1Q8NC60 698 aaKnown RBP9.43□□□□□ -0.9
VPS26B-207ENST00000532160 MAIP1Q8WWC4 291 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 HTR3CQ8WXA8 447 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 MAML1Q92585 1016 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 NAF1Q96HR8 494 aaKnown RBP9.43□□□□□ -0.9
VPS26B-207ENST00000532160 BMFQ96LC9 184 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 APOLD1Q96LR9 279 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 CCDC114Q96M63 670 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 HDAC8Q9BY41 377 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 DYRK4Q9NR20 520 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 GPR27Q9NS67 375 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 DNAJC28Q9NX36 388 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 NLGN3Q9NZ94 848 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 HECAQ9UBI9 543 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-207ENST00000532160 SEPT3Q9UH03 358 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 IL36AQ9UHA7 158 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 TTC7AQ9ULT0 858 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-207ENST00000532160 ZNF148Q9UQR1 794 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 WASF2Q9Y6W5 498 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 PIEZO2Q9H5I5 2752 aa9.43□□□□□ -0.9
VPS26B-207ENST00000532160 GOLGA6BA6NDN3 693 aa9.42□□□□□ -0.9
VPS26B-207ENST00000532160 HACD1B0YJ81 288 aa9.42□□□□□ -0.9
VPS26B-207ENST00000532160 K7ESM1 405 aa9.42□□□□□ -0.9
VPS26B-207ENST00000532160 CSO75390 466 aaKnown RBP9.42□□□□□ -0.9
VPS26B-207ENST00000532160 PIGNO95427 931 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms