RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 ACCSLQ4AC99 568 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 GLE1Q53GS7 698 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ANKRD20A8PQ5CZ79 823 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 DGKKQ5KSL6 1271 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ANKRD20A2Q5SQ80 823 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 FAM83BQ5T0W9 1011 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 RNASEH2BQ5TBB1 312 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 MAP3K21Q5TCX8 1036 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ANKRD20A1Q5TYW2 823 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ANKRD20A3Q5VUR7 823 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 SNX30Q5VWJ9 437 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 NAA35Q5VZE5 725 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ANO1Q5XXA6 986 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ALS2CLQ60I27 953 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 SPECC1LQ69YQ0 1117 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 HIBCHQ6NVY1 386 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ZNF790Q6PG37 636 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 C1orf228Q6PIY5 440 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 TOGARAM2Q6ZUX3 1019 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 RAPH1Q70E73 1250 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 CHD1LQ86WJ1 897 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 CHSY1Q86X52 802 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 CCDC28AQ8IWP9 274 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 HACE1Q8IYU2 909 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 CCDC63Q8NA47 563 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 OR7G1Q8NGA0 311 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ANGPTL6Q8NI99 470 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 GJA10Q969M2 543 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 SH3KBP1Q96B97 665 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 DHX58Q96C10 678 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 IFT74Q96LB3 600 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 SH3GL2Q99962 352 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 RNF26Q9BY78 433 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 PCDHAC1Q9H158 963 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 STMN4Q9H169 189 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 PLEKHA4Q9H4M7 779 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 PLEKHA5Q9HAU0 1116 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 RIC8AQ9NPQ8 531 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 CCDC177Q9NQR7 707 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 INIPQ9NRY2 104 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 FARSBQ9NSD9 589 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 DDX19AQ9NUU7 478 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 MRGBPQ9NV56 204 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 HAUS2Q9NVX0 235 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 HYPKQ9NX55 129 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 EHD2Q9NZN4 543 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 GRID1Q9ULK0 1009 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 VANGL2Q9ULK5 521 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 NFU1Q9UMS0 254 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 PA2G4Q9UQ80 394 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 HBS1LQ9Y450 684 aaKnown RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 L3MBTL1Q9Y468 752 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ANGPTL3Q9Y5C1 460 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 SNX8Q9Y5X2 465 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 CEMIPQ8WUJ3 1361 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 AHDC1Q5TGY3 1603 aaPredicted RBP4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 ITSN1Q15811 1721 aa4.75□□□□□ -1.65
HMGB3P13-201ENST00000511263 MYO3BQ8WXR4 1341 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 MED1Q15648 1581 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 BCL9O00512 1426 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 GOLGA8QA0A0J9YX86 632 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 SMIM31A0A1B0GVY4 71 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 GOLGA8OA6NCC3 632 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 MAGEA13PA6NCF6 341 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 GOLGA8NF8WBI6 632 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 PODXLO00592 558 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 NCAM2O15394 837 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 RANBP6O60518 1105 aaKnown RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 GMNNO75496 209 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 OR5F1O95221 314 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 STARD3NLO95772 234 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 CELA2AP08217 269 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 ALOX5P09917 674 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 UBTFL6P0CB48 400 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 SRGAP2BP0DMP2 458 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 TMIGD3P0DMS9 266 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 DLATP10515 647 aaKnown RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 CYP2D6P10635 497 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 GZMAP12544 262 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 DDX5P17844 614 aaKnown RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 VCLP18206 1134 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 KELP23276 732 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 MST1P26927 711 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 EPHB2P29323 1055 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 TACR3P29371 465 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 NTSR1P30989 418 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 KRT20P35900 424 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 RGS2P41220 211 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 TECP42680 631 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 HAAOP46952 286 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 JAK3P52333 1124 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 HSD17B7P56937 341 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 PSG6Q00889 435 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 TFF2Q03403 129 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 KLHL30Q0D2K2 578 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 CUL1Q13616 776 aa4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 SIM2Q14190 667 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 ZNF268Q14587 947 aaPredicted RBP4.74□□□□□ -1.65
HMGB3P13-201ENST00000511263 MFSD13AQ14CX5 517 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms