RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 ATP2C2O75185 946 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 GPC4O75487 556 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 HIST1H2ABP04908 130 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 FYNP06241 537 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 MMP2P08253 660 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 HIST1H2ADP20671 130 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 CLCN5P51795 746 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 CSE1LP55060 971 aaKnown RBP4.6□□□□□ -1.67
VPS13A-211ENST00000484581 TAS2R40P59535 323 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 HSF1Q00613 529 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 PLEKHO1Q53GL0 409 aaPredicted RBP4.6□□□□□ -1.67
VPS13A-211ENST00000484581 CCDC92Q53HC0 331 aaPredicted RBP4.6□□□□□ -1.67
VPS13A-211ENST00000484581 ESCO2Q56NI9 601 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 IGSF11Q5DX21 431 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.6□□□□□ -1.67
VPS13A-211ENST00000484581 PLBD1Q6P4A8 553 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 HIST3H2AQ7L7L0 130 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 GLRX5Q86SX6 157 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 ZSCAN30Q86W11 494 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 CCDC13Q8IYE1 715 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 SCYL3Q8IZE3 742 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 ZBTB2Q8N680 514 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 BEST2Q8NFU1 509 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 MRPS27Q92552 414 aaKnown RBP4.6□□□□□ -1.67
VPS13A-211ENST00000484581 HARBI1Q96MB7 349 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 UROC1Q96N76 676 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 FNBP1Q96RU3 617 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 TIMP4Q99727 224 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 PIMREGQ9BSJ6 248 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 SYT17Q9BSW7 474 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 SLC25A23Q9BV35 468 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 THUMPD3Q9BV44 507 aaKnown RBP4.6□□□□□ -1.67
VPS13A-211ENST00000484581 MBNL1Q9NR56 388 aaKnown RBP4.6□□□□□ -1.67
VPS13A-211ENST00000484581 PAPOLBQ9NRJ5 636 aaKnown RBP4.6□□□□□ -1.67
VPS13A-211ENST00000484581 ASB6Q9NWX5 421 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 GDE1Q9NZC3 331 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 SERGEFQ9UGK8 458 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 NDRG3Q9UGV2 375 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 ADAM21Q9UKJ8 722 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 WBP11Q9Y2W2 641 aaKnown RBP4.6□□□□□ -1.67
VPS13A-211ENST00000484581 CEPT1Q9Y6K0 416 aa4.6□□□□□ -1.67
VPS13A-211ENST00000484581 ZNF335Q9H4Z2 1342 aaPredicted RBP4.6□□□□□ -1.67
VPS13A-211ENST00000484581 TRIM64A6NGJ6 449 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 TRIM64BA6NI03 449 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 RHODO00212 210 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 WDR46O15213 610 aaKnown RBP4.59□□□□□ -1.67
VPS13A-211ENST00000484581 JRKO75564 520 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 MMP3P08254 477 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 CYP2A6P11509 494 aaPredicted RBP4.59□□□□□ -1.67
VPS13A-211ENST00000484581 FDPSP14324 419 aaKnown RBP4.59□□□□□ -1.67
VPS13A-211ENST00000484581 ANXA7P20073 488 aaKnown RBP4.59□□□□□ -1.67
VPS13A-211ENST00000484581 HOXC8P31273 242 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 TLX1P31314 330 aaPredicted RBP4.59□□□□□ -1.67
VPS13A-211ENST00000484581 SLC16A2P36021 539 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 CXCR3P49682 368 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 SUOXP51687 545 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 YPEL5P62699 121 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 ECT2LQ008S8 904 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 NAE1Q13564 534 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 ODF2Q5BJF6 829 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 SGO1Q5FBB7 561 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 TTC39AQ5SRH9 613 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 LRIF1Q5T3J3 769 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 PLEKHA7Q6IQ23 1121 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 CES5AQ6NT32 575 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 LINGO2Q7L985 606 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 CCDC91Q7Z6B0 441 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 CREBRFQ8IUR6 639 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 DENND6AQ8IWF6 608 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 WDR63Q8IWG1 891 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 DDIASQ8IXT1 998 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 NUP93Q8N1F7 819 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 CMASQ8NFW8 434 aaPredicted RBP4.59□□□□□ -1.67
VPS13A-211ENST00000484581 OR14L1PQ8NHC6 308 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 SETD6Q8TBK2 473 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 LPGAT1Q92604 370 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 SECISBP2LQ93073 1101 aaKnown RBP4.59□□□□□ -1.67
VPS13A-211ENST00000484581 PTERQ96BW5 349 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 ARSGQ96EG1 525 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 PPP1R13BQ96KQ4 1090 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 GAD1Q99259 594 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 CDT1Q9H211 546 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 DBNDD1Q9H9R9 158 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 SLC28A3Q9HAS3 691 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 DDX4Q9NQI0 724 aaKnown RBP4.59□□□□□ -1.67
VPS13A-211ENST00000484581 PAG1Q9NWQ8 432 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 ANKRD10Q9NXR5 420 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 COPG2Q9UBF2 871 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 CRNNQ9UBG3 495 aaPredicted RBP4.59□□□□□ -1.67
VPS13A-211ENST00000484581 FBXW11Q9UKB1 542 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 ZNF148Q9UQR1 794 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 LAMP3Q9UQV4 416 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 R3HDM2Q9Y2K5 976 aaKnown RBP4.59□□□□□ -1.67
VPS13A-211ENST00000484581 WNT6Q9Y6F9 365 aa4.59□□□□□ -1.67
VPS13A-211ENST00000484581 C2CD4BA6NLJ0 364 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 PLRG1O43660 514 aaKnown RBP4.58□□□□□ -1.68
VPS13A-211ENST00000484581 TOP3BO95985 862 aaKnown RBP4.58□□□□□ -1.68
VPS13A-211ENST00000484581 ERCC2P18074 760 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 CHATP28329 748 aa4.58□□□□□ -1.68
VPS13A-211ENST00000484581 HOXC13P31276 330 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms