RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 DDX56Q9NY93 547 aaKnown RBP20.92■□□□□ 0.94
SREBF1-210ENST00000471445 GULP1Q9UBP9 304 aa20.92■□□□□ 0.94
SREBF1-210ENST00000471445 DNPEPQ9ULA0 475 aa20.92■□□□□ 0.94
SREBF1-210ENST00000471445 CHKBQ9Y259 395 aa20.92■□□□□ 0.94
SREBF1-210ENST00000471445 KCNK1O00180 336 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 LCA5LO95447 670 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 MMP2P08253 660 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 COMTP21964 271 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 PDX1P52945 283 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 EPHB1P54762 984 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 RPL26P61254 145 aaKnown RBP20.91■□□□□ 0.94
SREBF1-210ENST00000471445 CNTD1Q8N815 330 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 CCDC74AQ96AQ1 378 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 GRAMD1AQ96CP6 724 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 DCBLD2Q96PD2 775 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 LYSMD1Q96S90 227 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 ANP32EQ9BTT0 268 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 PCDH9Q9HC56 1237 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 RABGEF1Q9UJ41 708 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 RPL26L1Q9UNX3 145 aaKnown RBP20.91■□□□□ 0.94
SREBF1-210ENST00000471445 HYOU1Q9Y4L1 999 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 HEY1Q9Y5J3 304 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 ENTPD2Q9Y5L3 495 aa20.91■□□□□ 0.94
SREBF1-210ENST00000471445 SCN8AQ9UQD0 1980 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 NTN3O00634 580 aaPredicted RBP20.9■□□□□ 0.94
SREBF1-210ENST00000471445 CASC3O15234 703 aaKnown RBP20.9■□□□□ 0.94
SREBF1-210ENST00000471445 NOBOXO60393 691 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 USP12O75317 370 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 DXOO77932 396 aaKnown RBP20.9■□□□□ 0.94
SREBF1-210ENST00000471445 JCHAINP01591 159 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 CEACAM5P06731 702 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 ACTN2P35609 894 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 EIF2S3P41091 472 aaKnown RBP20.9■□□□□ 0.94
SREBF1-210ENST00000471445 STC1P52823 247 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 GABREP78334 506 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 PTSQ03393 145 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 OGFOD3Q6PK18 319 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 RFLNAQ6ZTI6 216 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 ZNF765Q7L2R6 523 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 TAF8Q7Z7C8 310 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 RAVER1Q8IY67 606 aaKnown RBP20.9■□□□□ 0.94
SREBF1-210ENST00000471445 LPCAT1Q8NF37 534 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 CCL4L1Q8NHW4 92 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 HNRNPLLQ8WVV9 542 aaKnown RBP20.9■□□□□ 0.94
SREBF1-210ENST00000471445 RNF25Q96BH1 459 aaPredicted RBP20.9■□□□□ 0.94
SREBF1-210ENST00000471445 ABCG8Q9H221 673 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 CARS2Q9HA77 564 aaKnown RBP20.9■□□□□ 0.94
SREBF1-210ENST00000471445 CD84Q9UIB8 345 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 MOSPD1Q9UJG1 213 aa20.9■□□□□ 0.94
SREBF1-210ENST00000471445 GOLGA6CA6NDK9 693 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 GOLGA6BA6NDN3 693 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 PPP1R12AO14974 1030 aaPredicted RBP20.89■□□□□ 0.93
SREBF1-210ENST00000471445 PSTPIP1O43586 416 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 SPOPO43791 374 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 MPOP05164 745 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 GOLGA6DP0CG33 693 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 ZFXP17010 805 aaPredicted RBP20.89■□□□□ 0.93
SREBF1-210ENST00000471445 MAGEA1P43355 309 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 GPR1P46091 355 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 SKOR1P84550 965 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 PDK1Q15118 436 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 TAZQ16635 292 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 MFSD7Q6UXD7 560 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 NPNTQ6UXI9 565 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 ADAMTSL4Q6UY14 1074 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 NLRP8Q86W28 1048 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 RFX6Q8HWS3 928 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 OR6C4Q8NGE1 309 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 AP2M1Q96CW1 435 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 MAK16Q9BXY0 300 aaKnown RBP20.89■□□□□ 0.93
SREBF1-210ENST00000471445 POLR1BQ9H9Y6 1135 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 GOLGA6AQ9NYA3 693 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 SLC17A4Q9Y2C5 497 aa20.89■□□□□ 0.93
SREBF1-210ENST00000471445 FUCA1P04066 466 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 PYGLP06737 847 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 IVLP07476 585 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 CD86P42081 329 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 ABCG1P45844 678 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 LSSP48449 732 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 AP1B1Q10567 949 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 SPIDRQ14159 915 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 IGF2-ASQ6U949 168 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 FAM46DQ8NEK8 389 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 GPBAR1Q8TDU6 330 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 PTCD2Q8WV60 388 aaKnown RBP20.88■□□□□ 0.93
SREBF1-210ENST00000471445 FGF11Q92914 225 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 SCAMP4Q969E2 229 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 ATXN7L3BQ96GX2 97 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 TRNAU1APQ9NX07 287 aaKnown RBP20.88■□□□□ 0.93
SREBF1-210ENST00000471445 SUFUQ9UMX1 484 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 LAMA5O15230 3695 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 UNC13CQ8NB66 2214 aa20.88■□□□□ 0.93
SREBF1-210ENST00000471445 A0A1W2PNU3 283 aaPredicted RBP20.87■□□□□ 0.93
SREBF1-210ENST00000471445 B4DGG1 531 aa20.87■□□□□ 0.93
SREBF1-210ENST00000471445 TNNT1P13805 278 aa20.87■□□□□ 0.93
SREBF1-210ENST00000471445 CDKN2BP42772 138 aa20.87■□□□□ 0.93
SREBF1-210ENST00000471445 DYNLT1P63172 113 aa20.87■□□□□ 0.93
SREBF1-210ENST00000471445 HLTFQ14527 1009 aaKnown RBP eCLIP20.87■□□□□ 0.93
SREBF1-210ENST00000471445 QPCTQ16769 361 aa20.87■□□□□ 0.93
SREBF1-210ENST00000471445 C14orf28Q4W4Y0 310 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms