RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 DENND6AQ8IWF6 608 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 KRT78Q8N1N4 520 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 PQLC3Q8N755 202 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 ATG16L2Q8NAA4 619 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 AGAP11Q8TF27 550 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 PYDC1Q8WXC3 89 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 AGAP2Q99490 1192 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 WDR55Q9H6Y2 383 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 BRD9Q9H8M2 597 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 PRPF19Q9UMS4 504 aaKnown RBP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 CCL22O00626 93 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 FANCGO15287 622 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 MAP3K13O43283 966 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 SH3BGRLO75368 114 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 PRAMEF1O95521 474 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 OGNP20774 298 aaKnown RBP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 EIF2B5Q13144 721 aaKnown RBP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 MSANTD2Q6P1R3 559 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 SCIMPQ6UWF3 145 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 CHST9Q7L1S5 443 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 ITFG1Q8TB96 612 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 RCN3Q96D15 328 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 UNC93B1Q9H1C4 597 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 LRMDAQ9H2I8 198 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 ATAD3AQ9NVI7 634 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 SNX8Q9Y5X2 465 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 LRP5O75197 1615 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 ILVBLA1L0T0 632 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 ENTPD5O75356 428 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 GOT2P00505 430 aaKnown RBP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 CHRNA4P43681 627 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 GALNT2Q10471 571 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 ABRQ12979 859 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 IYDQ6PHW0 289 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 FITM2Q8N6M3 262 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 BHLHE22Q8NFJ8 381 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 ZSCAN18Q8TBC5 510 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 ZNF184Q99676 751 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 GATA5Q9BWX5 397 aaPredicted RBP13.78□□□□□ -0.2
BRAT1-203ENST00000467558 CCSER2Q9H7U1 834 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 CREBZFQ9NS37 354 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 FBXO10Q9UK96 956 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 SLC12A4Q9UP95 1085 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 HS3ST4Q9Y661 456 aa13.78□□□□□ -0.2
BRAT1-203ENST00000467558 HNRNPCL2B2RXH8 293 aa13.77□□□□□ -0.2
BRAT1-203ENST00000467558 GABRDO14764 452 aa13.77□□□□□ -0.2
BRAT1-203ENST00000467558 ACRP10323 421 aa13.77□□□□□ -0.2
BRAT1-203ENST00000467558 CCL5P13501 91 aa13.77□□□□□ -0.2
BRAT1-203ENST00000467558 RPL38P63173 70 aaKnown RBP13.77□□□□□ -0.2
BRAT1-203ENST00000467558 ZC3H12BQ5HYM0 836 aaKnown RBP13.77□□□□□ -0.2
BRAT1-203ENST00000467558 SPPL2AQ8TCT8 520 aa13.77□□□□□ -0.2
BRAT1-203ENST00000467558 ERLEC1Q96DZ1 483 aa13.77□□□□□ -0.2
BRAT1-203ENST00000467558 ZFP14Q9HCL3 533 aa13.77□□□□□ -0.2
BRAT1-203ENST00000467558 ZNHIT2Q9UHR6 403 aa13.77□□□□□ -0.2
BRAT1-203ENST00000467558 TEX264Q9Y6I9 313 aa13.77□□□□□ -0.2
BRAT1-203ENST00000467558 TRIM38O00635 465 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 GUCY1B2O75343 617 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 EPN2O95208 641 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 HLA-DQB2P05538 268 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 GJA5P36382 358 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 SLC18A1P54219 525 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 WNT7BP56706 349 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 LACTB2Q53H82 288 aaPredicted RBP13.77□□□□□ -0.21
BRAT1-203ENST00000467558 OTUD3Q5T2D3 398 aaPredicted RBP13.77□□□□□ -0.21
BRAT1-203ENST00000467558 ZNF461Q8TAF7 563 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 GFM2Q969S9 779 aaKnown RBP13.77□□□□□ -0.21
BRAT1-203ENST00000467558 CCDC28BQ9BUN5 200 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 GKN1Q9NS71 199 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 ARL8BQ9NVJ2 186 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 FCF1Q9Y324 198 aaKnown RBP13.77□□□□□ -0.21
BRAT1-203ENST00000467558 ESR1P03372 595 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 PRNPP04156 253 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 LINC00032P0C843 101 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 SLC10A7Q0GE19 358 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 BNIP1Q12981 228 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 KLF10Q13118 480 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 EID3Q8N140 333 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 FSTL5Q8N475 847 aaPredicted RBP13.77□□□□□ -0.21
BRAT1-203ENST00000467558 CLP1Q92989 425 aaKnown RBP13.77□□□□□ -0.21
BRAT1-203ENST00000467558 AZIN2Q96A70 460 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 TMEM79Q9BSE2 394 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 C11orf84Q9BUA3 381 aaPredicted RBP13.77□□□□□ -0.21
BRAT1-203ENST00000467558 C9orf16Q9BUW7 83 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 TNKS2Q9H2K2 1166 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 FAM83DQ9H4H8 585 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 RAD21L1Q9H4I0 556 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 AP4S1Q9Y587 144 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 C4AP0C0L4 1744 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 NHSQ6T4R5 1651 aa13.77□□□□□ -0.21
BRAT1-203ENST00000467558 MBLAC1A4D2B0 266 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-203ENST00000467558 TK2O00142 265 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 RECQL5O94762 991 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-203ENST00000467558 CLPTM1O96005 669 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 PTGER3P43115 390 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 ELP6Q0PNE2 266 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 TAF1AQ15573 450 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-203ENST00000467558 MORN1Q5T089 497 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 UBE2R2Q712K3 238 aaPredicted RBP13.76□□□□□ -0.21
BRAT1-203ENST00000467558 MPP5Q8N3R9 675 aa13.76□□□□□ -0.21
BRAT1-203ENST00000467558 C11orf49Q9H6J7 331 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms