RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 LRRC8CQ8TDW0 803 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 CCDC12Q8WUD4 166 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 DEPDC1BQ8WUY9 529 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 NSMCE1Q8WV22 266 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 HEXDCQ8WVB3 486 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 UBLCP1Q8WVY7 318 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 SLC13A3Q8WWT9 602 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 KIAA1191Q96A73 305 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 SLC25A36Q96CQ1 311 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZDHHC12Q96GR4 267 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 CHAMP1Q96JM3 812 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 CCDC140Q96MF4 163 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF558Q96NG5 402 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TRNT1Q96Q11 434 aaKnown RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 RANBP9Q96S59 729 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 HEPHQ9BQS7 1158 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 OR51V1Q9H2C8 321 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 EPB41L1Q9H4G0 881 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 ACTR5Q9H9F9 607 aaPredicted RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 PCDH9Q9HC56 1237 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TMEM8AQ9HCN3 771 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 TREM1Q9NP99 234 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 AGPAT5Q9NUQ2 364 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 PAG1Q9NWQ8 432 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 GID8Q9NWU2 228 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 C11orf21Q9P2W6 132 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 CTNNAL1Q9UBT7 734 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 SPATA2Q9UM82 520 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 CLCA2Q9UQC9 943 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 SAMHD1Q9Y3Z3 626 aaKnown RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 NPFFR2Q9Y5X5 522 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 FPGT-TNNI3KV9GXZ4 949 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 IQGAP1P46940 1657 aa4.77□□□□□ -1.65
HMGB3P9-201ENST00000441799 NLRP1Q9C000 1473 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 LRP5O75197 1615 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZSCAN5BA6NJL1 495 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 B4E1Z4 1266 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 H0Y8G0 127 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 H0YAE9 185 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 H0YJX3 145 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 K7ESF4 209 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PGRMC1O00264 195 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 POLRMTO00411 1230 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 POLR1CO15160 346 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 SLC22A1O15245 554 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 EIF3HO15372 352 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CD3EAPO15446 510 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 NARSO43776 548 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 EXOC3O60645 756 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 SHOX2O60902 331 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 TADA2AO75478 443 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 TOM1L1O75674 476 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PIK3C2GO75747 1445 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 KRT37O76014 449 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 DDNO94850 711 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CDK14O94921 469 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 HEXIM1O94992 359 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PCDH8O95206 1070 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CFBP00751 764 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CKMP06732 381 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ERVK-10P10266 1014 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ARP10275 920 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ODC1P11926 461 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 IL1R1P14778 569 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 HNRNPLP14866 589 aaKnown RBP eCLIP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CCND1P24385 295 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PDHA2P29803 388 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 GNA11P29992 359 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 SLC7A1P30825 629 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 SLC5A2P31639 672 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 AKT1P31749 480 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CTNNB1P35222 781 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 THPOP40225 353 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CCR10P46092 362 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PITPNBP48739 271 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CAMLGP49069 296 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 NT5C2P49902 561 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CLCNKAP51800 687 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF41P51814 821 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ZNF135P52742 658 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PPP5CP53041 499 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 COPB1P53618 953 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CASP9P55211 416 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 GFRA1P56159 465 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 AP1S2P56377 157 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PEX3P56589 373 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ARF3P61204 181 aaPredicted RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 HPCAP84074 193 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ARF1P84077 181 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 CEBPZQ03701 1054 aaKnown RBP4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 RELAQ04206 551 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 GRIN1Q05586 938 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 ELP6Q0PNE2 266 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 FSTL1Q12841 308 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 PPIL2Q13356 520 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 SEMA5AQ13591 1074 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 DYRK1AQ13627 763 aa4.76□□□□□ -1.65
HMGB3P9-201ENST00000441799 RRP1BQ14684 758 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms