RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 CR2P20023 1033 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 SP100P23497 879 aaPredicted RBP10.42□□□□□ -0.74
CPNE1-218ENST00000439806 FMO4P31512 558 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 INHBCP55103 352 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 MTTPP55157 894 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 NFKB2Q00653 900 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 DSG1Q02413 1049 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 TWF1Q12792 350 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 CCNIQ14094 377 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 UNC50Q53HI1 259 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 TCHHL1Q5QJ38 904 aaPredicted RBP10.42□□□□□ -0.74
CPNE1-218ENST00000439806 ZNF678Q5SXM1 525 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 IRGCQ6NXR0 463 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 SLC39A5Q6ZMH5 540 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 ADGRG6Q86SQ4 1221 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 ISCA2Q86U28 154 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 HPS6Q86YV9 775 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 SPNS2Q8IVW8 549 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 DSELQ8IZU8 1212 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 PGAM4Q8N0Y7 254 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 SLC39A11Q8N1S5 342 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 EFCAB3Q8N7B9 438 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 EFHBQ8N7U6 833 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 PTGR2Q8N8N7 351 aaPredicted RBP10.42□□□□□ -0.74
CPNE1-218ENST00000439806 SHKBP1Q8TBC3 707 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 WBP2Q969T9 261 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 PTERQ96BW5 349 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 TCF12Q99081 682 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 EFCAB1Q9HAE3 211 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 SMPD4Q9NXE4 827 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 TAS2R13Q9NYV9 303 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 HACD3Q9P035 362 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 PPM1HQ9ULR3 514 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 POMPQ9Y244 141 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 TBC1D30Q9Y2I9 924 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 LRCH1Q9Y2L9 728 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 TRAF6Q9Y4K3 522 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 DENND4CQ5VZ89 1909 aa10.42□□□□□ -0.74
CPNE1-218ENST00000439806 UBXN8O00124 270 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 UBDO15205 165 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 SNAP91O60641 907 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 C1RP00736 705 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 PDHA1P08559 390 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 GFAPP14136 432 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 LAG3P18627 525 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 MC4RP32245 332 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 ABL2P42684 1182 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 STX1BP61266 288 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 ATP6V0D1P61421 351 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 RHOAP61586 193 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 HERVK_113P63132 956 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 SMAD3P84022 425 aaKnown RBP10.41□□□□□ -0.74
CPNE1-218ENST00000439806 ARF5P84085 180 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 TRAF2Q12933 501 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 BLMHQ13867 455 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 RAB33AQ14088 237 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 FASTKQ14296 549 aaKnown RBP10.41□□□□□ -0.74
CPNE1-218ENST00000439806 GEN1Q17RS7 908 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 MMEL1Q495T6 779 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 TRIM60Q495X7 471 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 ZRANB3Q5FWF4 1079 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 CXorf57Q6NSI4 855 aaKnown RBP10.41□□□□□ -0.74
CPNE1-218ENST00000439806 NCEH1Q6PIU2 408 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 GK5Q6ZS86 529 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 RPS27LQ71UM5 84 aaKnown RBP10.41□□□□□ -0.74
CPNE1-218ENST00000439806 ANKRD33Q7Z3H0 272 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 DHDDSQ86SQ9 333 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 ITIH5Q86UX2 942 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 MFN1Q8IWA4 741 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 PELI3Q8N2H9 469 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 FBXO39Q8N4B4 442 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 NKAPQ8N5F7 415 aaKnown RBP10.41□□□□□ -0.74
CPNE1-218ENST00000439806 PAF1Q8N7H5 531 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 HIPK4Q8NE63 616 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 MDGA1Q8NFP4 955 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 RHEBL1Q8TAI7 183 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 PYDC1Q8WXC3 89 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.41□□□□□ -0.742e-6■■■■■ 26.8
CPNE1-218ENST00000439806 ZNF184Q99676 751 aaPredicted RBP10.41□□□□□ -0.74
CPNE1-218ENST00000439806 ERVK-6Q9BXR3 956 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 RNF38Q9H0F5 515 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 RNF208Q9H0X6 261 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 CXorf56Q9H5V9 222 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 WDR41Q9HAD4 459 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 PAK6Q9NQU5 681 aaPredicted RBP10.41□□□□□ -0.74
CPNE1-218ENST00000439806 POLR3BQ9NW08 1133 aaPredicted RBP10.41□□□□□ -0.74
CPNE1-218ENST00000439806 LHX3Q9UBR4 397 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 FKBPLQ9UIM3 349 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 VPS28Q9UK41 221 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 LSM7Q9UK45 103 aaKnown RBP10.41□□□□□ -0.74
CPNE1-218ENST00000439806 OGDHLQ9ULD0 1010 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 RNF112Q9ULX5 631 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 PCDHGC4Q9Y5F7 938 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 COL4A6Q14031 1691 aa10.41□□□□□ -0.74
CPNE1-218ENST00000439806 CARNS1A5YM72 827 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 SYCE1LA8MT33 242 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 KERAO60938 352 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 CRCPO75575 148 aa10.4□□□□□ -0.74
CPNE1-218ENST00000439806 SORBS2O94875 1100 aaKnown RBP10.4□□□□□ -0.74
CPNE1-218ENST00000439806 PRLP01236 227 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms