RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ZNF320A2RRD8 509 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 CFAP73A6NFT4 308 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 ZNF233A6NK53 670 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 A8MXE2 369 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 TTC34A8MYJ7 566 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 H0YAE9 185 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 BOLA2-SMG1P6H3BVE0 249 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 TMEM189-UBE2V1I3L0A0 370 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 AGPSO00116 658 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 PDXKO00764 312 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 HCRTO43612 131 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 SGTAO43765 313 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 ZBTB14O43829 449 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 CALUO43852 315 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 SEC22BO75396 215 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 AKAP3O75969 853 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 ANP32DO95626 131 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 F9P00740 461 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 KRT19P08727 400 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 OR4Q2P0C623 313 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 SFTPCP11686 197 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 IL9P15248 144 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 TNNI1P19237 187 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 CYP3A5P20815 502 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 SP100P23497 879 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 PSMA4P25789 261 aaKnown RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 KLRC2P26717 231 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 GCH1P30793 250 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 SDHAP31040 664 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 RPL9P32969 192 aaKnown RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 S100A5P33763 92 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 GGT5P36269 586 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 GATA4P43694 442 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 HARS2P49590 506 aaKnown RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 TKTL1P51854 596 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 ARPP19P56211 112 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 BPIFB4P59827 614 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 RPS3AP61247 264 aaKnown RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 RPP30P78346 268 aaKnown RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 ELF3P78545 371 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 PLOD1Q02809 727 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 SCAPQ12770 1279 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 STIM1Q13586 685 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 NFE2L1Q14494 772 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 NOMO1Q15155 1222 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 SEC23BQ15437 767 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 CCDC142Q17RM4 750 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 C2orf76Q3KRA6 126 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 CFAP157Q5JU67 520 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 RARS2Q5T160 578 aaKnown RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 DEPDC1Q5TB30 811 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 C9orf57Q5W0N0 161 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 MTFR2Q6P444 385 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 CEP68Q76N32 757 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 ANKS1BQ7Z6G8 1248 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 PALB2Q86YC2 1186 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 LURAP1LQ8IV03 231 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 CD302Q8IX05 232 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 C12orf56Q8IXR9 622 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 SLC7A5P1Q8MH63 180 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 SCML4Q8N228 414 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 GALNT4Q8N4A0 578 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 IL17RDQ8NFM7 739 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 OR6B3Q8NGW1 331 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 FBXO30Q8TB52 745 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 LNX1Q8TBB1 728 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 DEPDC1BQ8WUY9 529 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 KBTBD7Q8WVZ9 684 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 IFT81Q8WYA0 676 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 PABPC5Q96DU9 382 aaKnown RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 KTI12Q96EK9 354 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 APOPT1Q96IL0 206 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 SENP8Q96LD8 212 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 GBP5Q96PP8 586 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 KLHL5Q96PQ7 755 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 GSDMAQ96QA5 445 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 TUBGCP5Q96RT8 1024 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 DMRTA2Q96SC8 542 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 TMEM209Q96SK2 561 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 NDNQ99608 321 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 CITED2Q99967 270 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 SLC39A3Q9BRY0 314 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 TTPALQ9BTX7 342 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 THUMPD3Q9BV44 507 aaKnown RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 OSBPL10Q9BXB5 764 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 SLC12A9Q9BXP2 914 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 OSBPL6Q9BZF3 934 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 THAP9Q9H5L6 903 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 ASB7Q9H672 318 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 MMRN2Q9H8L6 949 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 VCX3AQ9NNX9 186 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 MRPL17Q9NRX2 175 aaKnown RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 INTS13Q9NVM9 706 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 DMAC2Q9NW81 257 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 ZNHIT6Q9NWK9 470 aaKnown RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 NDUFA13Q9P0J0 144 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 AKAP7Q9P0M2 348 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 C5AR2Q9P296 337 aa4.62□□□□□ -1.67
SF3B1-202ENST00000409915 ZNF624Q9P2J8 865 aaPredicted RBP4.62□□□□□ -1.67
SF3B1-202ENST00000409915 UBA2Q9UBT2 640 aaPredicted RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms