RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 CDK18Q07002 472 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 MZT1Q08AG7 82 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 DPYSQ14117 519 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 ZMYM3Q14202 1370 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 ACOX1Q15067 660 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 PCOLCEQ15113 449 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 CFAP221Q4G0U5 840 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 MDH1BQ5I0G3 518 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 FAM47AQ5JRC9 791 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 DNTTIP2Q5QJE6 756 aaKnown RBP5.02□□□□□ -1.61
GABPB1-204ENST00000396464 SFMBT2Q5VUG0 894 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 PLA2G4FQ68DD2 849 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 CCDC144NLQ6NUI1 221 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 NEK5Q6P3R8 708 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 LRIG3Q6UXM1 1119 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 CLEC9AQ6UXN8 241 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 CENPVQ7Z7K6 275 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-204ENST00000396464 GUF1Q8N442 669 aaKnown RBP5.02□□□□□ -1.61
GABPB1-204ENST00000396464 SIRT6Q8N6T7 355 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 Q8NA96 180 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-204ENST00000396464 LRRC8CQ8TDW0 803 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 NSMCE1Q8WV22 266 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 NEU4Q8WWR8 484 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-204ENST00000396464 LPGAT1Q92604 370 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 KAT2AQ92830 837 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 HES6Q96HZ4 224 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 FAM81BQ96LP2 452 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 FAM210AQ96ND0 272 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 OR2A14Q96R47 310 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 IFIH1Q9BYX4 1025 aaKnown RBP5.02□□□□□ -1.61
GABPB1-204ENST00000396464 RIBC2Q9H4K1 309 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 GBA2Q9HCG7 927 aaPredicted RBP5.02□□□□□ -1.61
GABPB1-204ENST00000396464 HAO2Q9NYQ3 351 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 ABI3Q9P2A4 366 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 SLC8A2Q9UPR5 921 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 R3HDM2Q9Y2K5 976 aaKnown RBP5.02□□□□□ -1.61
GABPB1-204ENST00000396464 SLC27A6Q9Y2P4 619 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 A0A0A6YYC8 382 aaPredicted RBP5.01□□□□□ -1.61
GABPB1-204ENST00000396464 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 A0A1W2PR77 199 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 CDHR4A6H8M9 788 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 C5orf51A6NDU8 294 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 LRRC53A6NM62 1247 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 CXorf49A8MYA2 514 aaPredicted RBP5.01□□□□□ -1.61
GABPB1-204ENST00000396464 FOXO6A8MYZ6 492 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 H0YIV9 168 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 I3L1I5 382 aaPredicted RBP5.01□□□□□ -1.61
GABPB1-204ENST00000396464 TRIM24O15164 1050 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 POLR3GO15318 223 aaPredicted RBP5.01□□□□□ -1.61
GABPB1-204ENST00000396464 NKX2-8O15522 239 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 ST8SIA3O43173 380 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 E2F6O75461 281 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 ERLIN1O75477 346 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 TRUB2O95900 331 aaKnown RBP5.01□□□□□ -1.61
GABPB1-204ENST00000396464 BCL10O95999 233 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 PLGP00747 810 aaPredicted RBP5.01□□□□□ -1.61
GABPB1-204ENST00000396464 ADH4P08319 380 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 FAM86B2P0C5J1 330 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 MMP9P14780 707 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 ITIH1P19827 911 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 LRPAP1P30533 357 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 FMO4P31512 558 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 HIBADHP31937 336 aaKnown RBP5.01□□□□□ -1.61
GABPB1-204ENST00000396464 ZNF134P52741 427 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 GALCP54803 685 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 DGCR2P98153 550 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 SATB1Q01826 763 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 DPTQ07507 201 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 GRSF1Q12849 480 aaKnown RBP eCLIP5.01□□□□□ -1.61
GABPB1-204ENST00000396464 CEBPEQ15744 281 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 AARDQ4LEZ3 155 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 FASTKD1Q53R41 847 aaKnown RBP5.01□□□□□ -1.61
GABPB1-204ENST00000396464 FAM91A1Q658Y4 838 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 SLC9A4Q6AI14 798 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 C17orf99Q6UX52 265 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 CXXC5Q7LFL8 322 aaKnown RBP5.01□□□□□ -1.61
GABPB1-204ENST00000396464 TRAPPC11Q7Z392 1133 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 SPATA21Q7Z572 469 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 CLEC14AQ86T13 490 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 SGMS1Q86VZ5 419 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 UXS1Q8NBZ7 420 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 CFAP61Q8NHU2 1237 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 TMEM171Q8WVE6 324 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 ARHGAP45Q92619 1136 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 KCNJ9Q92806 393 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 TMEM186Q96B77 213 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 TMEM176AQ96HP8 235 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 FAR2Q96K12 515 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.01□□□□□ -1.611e-6■■■□□ 14.7
GABPB1-204ENST00000396464 P2RY12Q9H244 342 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 VCPKMTQ9H867 229 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 GORASP2Q9H8Y8 452 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 FAM212BQ9NTI7 297 aaPredicted RBP5.01□□□□□ -1.61
GABPB1-204ENST00000396464 ARL8BQ9NVJ2 186 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 SMPD3Q9NY59 655 aaPredicted RBP5.01□□□□□ -1.61
GABPB1-204ENST00000396464 ETAA1Q9NY74 926 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 ERAP1Q9NZ08 941 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 DLGAP2Q9P1A6 1054 aa5.01□□□□□ -1.61
GABPB1-204ENST00000396464 GMEB2Q9UKD1 530 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms