RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 MSH2P43246 934 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 SUOXP51687 545 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 METAP1P53582 386 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 HSF5Q4G112 596 aaPredicted RBP14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 HSP90AA5PQ58FG0 334 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 MICALCLQ6ZW33 695 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 TSPAN33Q86UF1 283 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 CYP4X1Q8N118 509 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 PAF1Q8N7H5 531 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 OR4K2Q8NGD2 314 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 OR2T3Q8NH03 318 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 HDAC10Q969S8 669 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 TLCD1Q96CP7 247 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 SGSM3Q96HU1 749 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 TBATAQ96M53 351 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 MCMBPQ9BTE3 642 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 HDAC8Q9BY41 377 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 GPR63Q9BZJ6 419 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 FBRSQ9HAH7 460 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 ZFYVE1Q9HBF4 777 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 PCDH12Q9NPG4 1184 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 IARS2Q9NSE4 1012 aaKnown RBP14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 ZFATQ9P243 1243 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 WNT16Q9UBV4 365 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 PSAT1Q9Y617 370 aa14.75□□□□□ -0.05
SHKBP1-211ENST00000595945 C1orf232A0A0U1RR37 186 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 A0A1W2PQF6 199 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 CCDC162PA2VCL2 907 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 GOLGA6L10A6NI86 522 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 SMIM23A6NLE4 172 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 CCL22O00626 93 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 STX7O15400 261 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 RNF40O75150 1001 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 CLDN7O95471 211 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 GOT2P00505 430 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 COL9A1P20849 921 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 COPAP53621 1224 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 RALGDSQ12967 914 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 GPS2Q13227 327 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 FAM46CQ5VWP2 391 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 SDE2Q6IQ49 451 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 KIAA1211LQ6NV74 962 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 NEPROQ6NW34 567 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 PACS1Q6VY07 963 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 MMAAQ8IVH4 418 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 CTAGE3PQ8IX95 158 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 LMNTD2Q8IXW0 634 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 CBARPQ8N350 705 aaPredicted RBP14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 TXNDC5Q8NBS9 432 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 GPR150Q8NGU9 434 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 MZB1Q8WU39 189 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 PPP1R16AQ96I34 528 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 ATP6V1G3Q96LB4 118 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 AGAP2Q99490 1192 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 CPNE1Q99829 537 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 FAM167BQ9BTA0 163 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 PPANQ9NQ55 473 aaKnown RBP14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 NSMCE4AQ9NXX6 385 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 FKBPLQ9UIM3 349 aa14.74□□□□□ -0.05
SHKBP1-211ENST00000595945 KRBA1A5PL33 1030 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 GOLGA8TH3BQL2 631 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 GAPDHSO14556 408 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 AREL1O15033 823 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 RGS16O15492 202 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 SYNCRIPO60506 623 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 FAM155BO75949 473 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 ADH1BP00325 375 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 IL1BP01584 269 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 INHBAP08476 426 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 C1SP09871 688 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 CHRNB1P11230 501 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 ZNF30P17039 623 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 CD72P21854 359 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 NFKBIAP25963 317 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 MMP12P39900 470 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 GP5P40197 560 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 PSMD8P48556 350 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 SERPINB9P50453 376 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 STC1P52823 247 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 PTPN5P54829 565 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 CSE1LP55060 971 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 STARD6P59095 220 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 RPS14P62263 151 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 TMPRSS15P98073 1019 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 XIAPP98170 497 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 SATB1Q01826 763 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 SEMG2Q02383 582 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 PTSQ03393 145 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 THOC5Q13769 683 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 STARD3Q14849 445 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 SMAD1Q15797 465 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 LRRC73Q5JTD7 316 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 LRRC66Q68CR7 880 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 ZNF776Q68DI1 518 aaPredicted RBP14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 AFTPHQ6ULP2 937 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 ZNF852Q6ZMS4 543 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 KIAA0408Q6ZU52 694 aa14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 ERN2Q76MJ5 926 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 MTERF4Q7Z6M4 381 aaKnown RBP14.73□□□□□ -0.05
SHKBP1-211ENST00000595945 GALNT7Q86SF2 657 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms