RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 CNGA3Q16281 694 aa21.79■■□□□ 1.08
DDX39A-215ENST00000590696 DPYSL2Q16555 572 aa21.79■■□□□ 1.08
DDX39A-215ENST00000590696 TSR1Q2NL82 804 aaKnown RBP21.79■■□□□ 1.08
DDX39A-215ENST00000590696 DENND2CQ68D51 928 aa21.79■■□□□ 1.08
DDX39A-215ENST00000590696 SPECC1LQ69YQ0 1117 aa21.79■■□□□ 1.08
DDX39A-215ENST00000590696 TMCO3Q6UWJ1 677 aa21.79■■□□□ 1.08
DDX39A-215ENST00000590696 SPRED1Q7Z699 444 aa21.79■■□□□ 1.08
DDX39A-215ENST00000590696 PGBD5Q8N414 524 aa21.79■■□□□ 1.08
DDX39A-215ENST00000590696 SPOCK2Q92563 424 aa21.79■■□□□ 1.08
DDX39A-215ENST00000590696 HSPH1Q92598 858 aa21.79■■□□□ 1.08
DDX39A-215ENST00000590696 TRIM11Q96F44 468 aa21.79■■□□□ 1.08
DDX39A-215ENST00000590696 NUDCD1Q96RS6 583 aa21.79■■□□□ 1.08
DDX39A-215ENST00000590696 CCNL2Q96S94 520 aaPredicted RBP21.79■■□□□ 1.08
DDX39A-215ENST00000590696 PISDQ9UG56 409 aa21.79■■□□□ 1.08
DDX39A-215ENST00000590696 HELZ2Q9BYK8 2649 aaKnown RBP21.78■■□□□ 1.08
DDX39A-215ENST00000590696 CFAP46Q8IYW2 2715 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 A0A1W2PQC6 194 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 AGRPO00253 132 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 SOCS5O75159 536 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 PEX11BO96011 259 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 MYBL1P10243 752 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 MYCLP1P12525 358 aaPredicted RBP21.78■■□□□ 1.08
DDX39A-215ENST00000590696 TCF4P15884 667 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 VIPR1P32241 457 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 HSPA9P38646 679 aaKnown RBP21.78■■□□□ 1.08
DDX39A-215ENST00000590696 ZFP36L1Q07352 338 aaKnown RBP21.78■■□□□ 1.08
DDX39A-215ENST00000590696 BOLA3Q53S33 107 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 POLNQ7Z5Q5 900 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 NAP1L5Q96NT1 182 aaPredicted RBP21.78■■□□□ 1.08
DDX39A-215ENST00000590696 ISCUQ9H1K1 167 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 SUDS3Q9H7L9 328 aaPredicted RBP21.78■■□□□ 1.08
DDX39A-215ENST00000590696 CARS2Q9HA77 564 aaKnown RBP21.78■■□□□ 1.08
DDX39A-215ENST00000590696 NOD2Q9HC29 1040 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 PHPT1Q9NRX4 125 aaPredicted RBP21.78■■□□□ 1.08
DDX39A-215ENST00000590696 TMEM63CQ9P1W3 806 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 LOXL2Q9Y4K0 774 aa21.78■■□□□ 1.08
DDX39A-215ENST00000590696 EFSO43281 561 aa21.77■■□□□ 1.08
DDX39A-215ENST00000590696 NUDT21O43809 227 aaKnown RBP21.77■■□□□ 1.08
DDX39A-215ENST00000590696 MAFKO60675 156 aa21.77■■□□□ 1.08
DDX39A-215ENST00000590696 HEXIM1O94992 359 aaKnown RBP21.77■■□□□ 1.08
DDX39A-215ENST00000590696 BBS5Q8N3I7 341 aa21.77■■□□□ 1.08
DDX39A-215ENST00000590696 CSPG4P5Q96PW8 444 aa21.77■■□□□ 1.08
DDX39A-215ENST00000590696 TEX101Q9BY14 249 aa21.77■■□□□ 1.08
DDX39A-215ENST00000590696 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.77■■□□□ 1.08
DDX39A-215ENST00000590696 SPATS2LQ9NUQ6 558 aaKnown RBP21.77■■□□□ 1.08
DDX39A-215ENST00000590696 KCTD5Q9NXV2 234 aa21.77■■□□□ 1.08
DDX39A-215ENST00000590696 PHTF1Q9UMS5 762 aa21.77■■□□□ 1.08
DDX39A-215ENST00000590696 A0A1B0GTH6 734 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 FUCA1P04066 466 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 RARAP10276 462 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 CYP2A6P11509 494 aaPredicted RBP21.76■■□□□ 1.07
DDX39A-215ENST00000590696 CCNB1P14635 433 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 ITIH1P19827 911 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 NFKBIAP25963 317 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 ETV3P41162 512 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 MAXP61244 160 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 B4GALNT1Q00973 533 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 TRAF2Q12933 501 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 TGIF1Q15583 401 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 TMPRSS9Q7Z410 1059 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 HSD11B1LQ7Z5J1 315 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 HEATR4Q86WZ0 1026 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 NRROSQ86YC3 692 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 CBARPQ8N350 705 aaPredicted RBP21.76■■□□□ 1.07
DDX39A-215ENST00000590696 KIAA1524Q8TCG1 905 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 GPBAR1Q8TDU6 330 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 MGME1Q9BQP7 344 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 ACSL6Q9UKU0 697 aa21.76■■□□□ 1.07
DDX39A-215ENST00000590696 NVLO15381 856 aaKnown RBP21.75■■□□□ 1.07
DDX39A-215ENST00000590696 CEACAM5P06731 702 aa21.75■■□□□ 1.07
DDX39A-215ENST00000590696 LHCGRP22888 699 aa21.75■■□□□ 1.07
DDX39A-215ENST00000590696 MAZP56270 477 aaKnown RBP21.75■■□□□ 1.07
DDX39A-215ENST00000590696 PTPRRQ15256 657 aa21.75■■□□□ 1.07
DDX39A-215ENST00000590696 MARC1Q5VT66 337 aa21.75■■□□□ 1.07
DDX39A-215ENST00000590696 TXNRD3NBQ6F5E7 133 aa21.75■■□□□ 1.07
DDX39A-215ENST00000590696 SLITRK4Q8IW52 837 aa21.75■■□□□ 1.07
DDX39A-215ENST00000590696 ATPAF2Q8N5M1 289 aa21.75■■□□□ 1.07
DDX39A-215ENST00000590696 ZDHHC1Q8WTX9 485 aa21.75■■□□□ 1.07
DDX39A-215ENST00000590696 NSMCE1Q8WV22 266 aa21.75■■□□□ 1.07
DDX39A-215ENST00000590696 TMEM159Q96B96 161 aa21.75■■□□□ 1.07
DDX39A-215ENST00000590696 DTD2Q96FN9 168 aa21.75■■□□□ 1.07
DDX39A-215ENST00000590696 GSDMCQ9BYG8 508 aa21.75■■□□□ 1.07
DDX39A-215ENST00000590696 FRMD8Q9BZ67 464 aaPredicted RBP21.75■■□□□ 1.07
DDX39A-215ENST00000590696 UNC13CQ8NB66 2214 aa21.75■■□□□ 1.07
DDX39A-215ENST00000590696 SCN8AQ9UQD0 1980 aa21.74■■□□□ 1.07
DDX39A-215ENST00000590696 GOLGA6CA6NDK9 693 aa21.74■■□□□ 1.07
DDX39A-215ENST00000590696 GOLGA6BA6NDN3 693 aa21.74■■□□□ 1.07
DDX39A-215ENST00000590696 NPIPB15A6NHN6 443 aaPredicted RBP21.74■■□□□ 1.07
DDX39A-215ENST00000590696 B4GAT1O43505 415 aa21.74■■□□□ 1.07
DDX39A-215ENST00000590696 FGF1P05230 155 aa21.74■■□□□ 1.07
DDX39A-215ENST00000590696 GOLGA6DP0CG33 693 aa21.74■■□□□ 1.07
DDX39A-215ENST00000590696 ETV5P41161 510 aa21.74■■□□□ 1.07
DDX39A-215ENST00000590696 MMP13P45452 471 aa21.74■■□□□ 1.07
DDX39A-215ENST00000590696 GNPDA1P46926 289 aa21.74■■□□□ 1.07
DDX39A-215ENST00000590696 ILF3Q12906 894 aaKnown RBP eCLIP21.74■■□□□ 1.07
DDX39A-215ENST00000590696 PIGHQ14442 188 aaPredicted RBP21.74■■□□□ 1.07
DDX39A-215ENST00000590696 PHF19Q5T6S3 580 aa21.74■■□□□ 1.07
DDX39A-215ENST00000590696 Q6ZVL8 140 aa21.74■■□□□ 1.07
DDX39A-215ENST00000590696 SCRN2Q96FV2 425 aa21.74■■□□□ 1.07
DDX39A-215ENST00000590696 MED8Q96G25 268 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms