RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 IFI35P80217 286 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-219ENST00000580540 ILKQ13418 452 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 CDKN3Q16667 212 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 HES3Q5TGS1 186 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 LRRC66Q68CR7 880 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 ALG1LQ6GMV1 187 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 C11orf63Q6NUN7 778 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 ZCCHC8Q6NZY4 707 aaKnown RBP16.64■□□□□ 0.25
SREBF1-219ENST00000580540 Q6ZVL8 140 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 TMPRSS12Q86WS5 348 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 RCOR2Q8IZ40 523 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 PELI3Q8N2H9 469 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 CNTD1Q8N815 330 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 MCCC1Q96RQ3 725 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-219ENST00000580540 TDRD1Q9BXT4 1180 aaKnown RBP16.64■□□□□ 0.25
SREBF1-219ENST00000580540 CLPBQ9H078 707 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 WDR26Q9H7D7 661 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 SUDS3Q9H7L9 328 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-219ENST00000580540 PCDH9Q9HC56 1237 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 CD84Q9UIB8 345 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 REXO2Q9Y3B8 237 aaKnown RBP16.64■□□□□ 0.25
SREBF1-219ENST00000580540 DUSP10Q9Y6W6 482 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 PLXNB3Q9ULL4 1909 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 SPEGQ15772 3267 aa16.64■□□□□ 0.25
SREBF1-219ENST00000580540 EPG5Q9HCE0 2579 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 A0A0J9YYE9 177 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 TMEM8BA6NDV4 472 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 TMEM202A6NGA9 273 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 YY2O15391 372 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 TRBC1P01850 177 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 FECHP22830 423 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 KELP23276 732 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 E2F1Q01094 437 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 ELOCQ15369 112 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 RAET1GQ6H3X3 334 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 ESRP1Q6NXG1 681 aaKnown RBP16.63■□□□□ 0.25
SREBF1-219ENST00000580540 CRTC1Q6UUV9 634 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 RFLNAQ6ZTI6 216 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 BZW1Q7L1Q6 419 aaKnown RBP16.63■□□□□ 0.25
SREBF1-219ENST00000580540 KDELC2Q7Z4H8 507 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 KATNAL2Q8IYT4 538 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 FAM181AQ8N9Y4 354 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 KDF1Q8NAX2 398 aaPredicted RBP16.63■□□□□ 0.25
SREBF1-219ENST00000580540 KRT35Q92764 455 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 HAUS1Q96CS2 278 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 DTD2Q96FN9 168 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 OLFM3Q96PB7 478 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 LGR4Q9BXB1 951 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 HEMGNQ9BXL5 484 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 BRD8Q9H0E9 1235 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 MRPL40Q9NQ50 206 aaKnown RBP16.63■□□□□ 0.25
SREBF1-219ENST00000580540 KCTD5Q9NXV2 234 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 GULP1Q9UBP9 304 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 ZMIZ1Q9ULJ6 1067 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 PPIL1Q9Y3C6 166 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 FRYQ5TBA9 3013 aa16.63■□□□□ 0.25
SREBF1-219ENST00000580540 KNTC1P50748 2209 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 TRABD2BA6NFA1 517 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 LMO7DNF2Z398 122 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 PSMD11O00231 422 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 TPP1O14773 563 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 PRLP01236 227 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 PECAM1P16284 738 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-219ENST00000580540 TGM2P21980 687 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 NR2C2P49116 596 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 KIAA1024LP59773 190 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 SKOR1P84550 965 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 TARDBPQ13148 414 aaKnown RBP eCLIP16.62■□□□□ 0.25
SREBF1-219ENST00000580540 NR0B2Q15466 257 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 TAZQ16635 292 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 TFDP3Q5H9I0 405 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 CCDC181Q5TID7 509 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 KCTD16Q68DU8 428 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 NT5DC3Q86UY8 548 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 ZC3H18Q86VM9 953 aaKnown RBP16.62■□□□□ 0.25
SREBF1-219ENST00000580540 FSTL5Q8N475 847 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-219ENST00000580540 OR56A4Q8NGH8 313 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 IFI44Q8TCB0 444 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 TFB1MQ8WVM0 346 aaKnown RBP16.62■□□□□ 0.25
SREBF1-219ENST00000580540 SCG3Q8WXD2 468 aaKnown RBP16.62■□□□□ 0.25
SREBF1-219ENST00000580540 OR1E3Q8WZA6 343 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 P3H4Q92791 437 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 GLMNQ92990 594 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 PDXPQ96GD0 296 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 RBM41Q96IZ5 413 aaKnown RBP16.62■□□□□ 0.25
SREBF1-219ENST00000580540 RBM15Q96T37 977 aaKnown RBP eCLIP16.62■□□□□ 0.253e-7■■□□□ 12.6
SREBF1-219ENST00000580540 LACRTQ9GZZ8 138 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 ABCG4Q9H172 646 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 CYP4F12Q9HCS2 524 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 FGF22Q9HCT0 170 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 PHPT1Q9NRX4 125 aaPredicted RBP16.62■□□□□ 0.25
SREBF1-219ENST00000580540 SIRPGQ9P1W8 387 aa16.62■□□□□ 0.25
SREBF1-219ENST00000580540 IGF2RP11717 2491 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 hCG_1818297A0A087WSY0 165 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 LY6G6EA0A0G2JKS1 128 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 GOLGA6L6A8MZA4 724 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 PDE2AO00408 941 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-219ENST00000580540 CLDN7O95471 211 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 MMP2P08253 660 aa16.61■□□□□ 0.25
SREBF1-219ENST00000580540 TRIM23P36406 574 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms