RNA–Protein interactions for RNA: ENST00000546881.1

RAB5C-203, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 608 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-203ENST00000546881 ASH1LQ9NR48 2969 aaKnown RBP11.49□□□□□ -0.57
RAB5C-203ENST00000546881 RHPN2P1A8MT19 583 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 PDE2AO00408 941 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-203ENST00000546881 TNFRSF10CO14798 259 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 NUDT21O43809 227 aaKnown RBP11.49□□□□□ -0.57
RAB5C-203ENST00000546881 PRPSAP2O60256 369 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 RNF8O76064 485 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 WISP1O95388 367 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 FAM87AP0C7U9 286 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 CCDC172P0C7W6 258 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 PNLIPP16233 465 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 GM2AP17900 193 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 GNPDA1P46926 289 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 PPM1FP49593 454 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-203ENST00000546881 UBASH3AP57075 661 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 OR1D5P58170 312 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 AP1S1P61966 158 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 NFKB2Q00653 900 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 ZFP36L1Q07352 338 aaKnown RBP11.49□□□□□ -0.57
RAB5C-203ENST00000546881 IL10RBQ08334 325 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 MAMLD1Q13495 774 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 ZNF235Q14590 738 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 LBRQ14739 615 aaKnown RBP11.49□□□□□ -0.57
RAB5C-203ENST00000546881 TSR1Q2NL82 804 aaKnown RBP11.49□□□□□ -0.57
RAB5C-203ENST00000546881 LINC00303Q3SY05 128 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 TMEM164Q5U3C3 297 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 AFMIDQ63HM1 303 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 TMPRSS9Q7Z410 1059 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 PIM3Q86V86 326 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 ARHGAP12Q8IWW6 846 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 NPWQ8N729 165 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 ZSCAN1Q8NBB4 408 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 ZDHHC1Q8WTX9 485 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 TMEM159Q96B96 161 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 ECHDC3Q96DC8 303 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 PEBP4Q96S96 227 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 ZMYND15Q9H091 742 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 RTN4Q9NQC3 1192 aaKnown RBP11.49□□□□□ -0.57
RAB5C-203ENST00000546881 PHPT1Q9NRX4 125 aaPredicted RBP11.49□□□□□ -0.57
RAB5C-203ENST00000546881 SPATS2LQ9NUQ6 558 aaKnown RBP11.49□□□□□ -0.57
RAB5C-203ENST00000546881 SEPT3Q9UH03 358 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 PCDHGC4Q9Y5F7 938 aa11.49□□□□□ -0.57
RAB5C-203ENST00000546881 COL6A6A6NMZ7 2263 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 LRRC10BA6NIK2 292 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 EIF3CLB5ME19 914 aaKnown RBP11.48□□□□□ -0.57
RAB5C-203ENST00000546881 C9orf172C9J069 976 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 TRAFD1O14545 582 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-203ENST00000546881 CPNE6O95741 557 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 CPP00450 1065 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 HOXC4P09017 264 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-203ENST00000546881 MYCLP1P12525 358 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-203ENST00000546881 CCNB1P14635 433 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 TRIM23P36406 574 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 RENBPP51606 427 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 CYP4F2P78329 520 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 B4GALNT1Q00973 533 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 NSUN2Q08J23 767 aaKnown RBP eCLIP11.48□□□□□ -0.57
RAB5C-203ENST00000546881 SLC10A7Q0GE19 358 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 ILF3Q12906 894 aaKnown RBP eCLIP11.48□□□□□ -0.572e-6■□□□□ 11.1
RAB5C-203ENST00000546881 RFTN1Q14699 578 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-203ENST00000546881 C16orf72Q14CZ0 275 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 CNGA3Q16281 694 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 TMCO4Q5TGY1 634 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 DOK6Q6PKX4 331 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 SLC30A9Q6PML9 568 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 HEATR4Q86WZ0 1026 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 SLITRK4Q8IW52 837 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 TP53INP2Q8IXH6 220 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 RCBTB1Q8NDN9 531 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 NSMCE3Q96MG7 304 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 NAP1L5Q96NT1 182 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-203ENST00000546881 ERGIC2Q96RQ1 377 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 EIF3CQ99613 913 aaKnown RBP11.48□□□□□ -0.57
RAB5C-203ENST00000546881 GSDMCQ9BYG8 508 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 TRIM7Q9C029 511 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 TAAR2Q9P1P5 351 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 ACSL6Q9UKU0 697 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 PCDHGA4Q9Y5G9 962 aa11.48□□□□□ -0.57
RAB5C-203ENST00000546881 SCN8AQ9UQD0 1980 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 A0A1B0GTH6 734 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.47□□□□□ -0.57
RAB5C-203ENST00000546881 ZW10O43264 779 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 CBFA2T2O43439 604 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 B4GAT1O43505 415 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 ECEL1O95672 775 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 ITGB2P05107 769 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 FGF1P05230 155 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 CCL4P13236 92 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 AK4P27144 223 aaPredicted RBP11.47□□□□□ -0.57
RAB5C-203ENST00000546881 MIPP30301 263 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 VIPR1P32241 457 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 ETV3P41162 512 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 RAET1GQ6H3X3 334 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 PPP1R2P3Q6NXS1 205 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 APTXQ7Z2E3 356 aaKnown RBP11.47□□□□□ -0.57
RAB5C-203ENST00000546881 NRROSQ86YC3 692 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 ARFGAP1Q8N6T3 406 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 GPBAR1Q8TDU6 330 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 PATE1Q8WXA2 126 aa11.47□□□□□ -0.57
RAB5C-203ENST00000546881 CCDC74BQ96LY2 380 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms