RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 ABCB7O75027 752 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 LRP4O75096 1905 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 PCCBP05166 539 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 MYBL1P10243 752 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 RARAP10276 462 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 SERPINA4P29622 427 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 CCKBRP32239 447 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 SCNN1BP51168 640 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 HK3P52790 923 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 CYP4F2P78329 520 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 FANCCQ00597 558 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 RFTN1Q14699 578 aaPredicted RBP11.9□□□□□ -0.5
GABPB1-206ENST00000543881 LBRQ14739 615 aaKnown RBP11.9□□□□□ -0.5
GABPB1-206ENST00000543881 NFATC4Q14934 902 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 CFAP58Q5T655 872 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 ENPP7Q6UWV6 458 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 LIPIQ6XZB0 460 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 POLNQ7Z5Q5 900 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 HID1Q8IV36 788 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 PELI3Q8N2H9 469 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 PGBD5Q8N414 524 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 FSTL5Q8N475 847 aaPredicted RBP11.9□□□□□ -0.5
GABPB1-206ENST00000543881 PCDH19Q8TAB3 1148 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 SCG3Q8WXD2 468 aaKnown RBP11.9□□□□□ -0.5
GABPB1-206ENST00000543881 HSPH1Q92598 858 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 TRIM11Q96F44 468 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 CSPG4P5Q96PW8 444 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 PSKH2Q96QS6 385 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 THAP2Q9H0W7 228 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 ZWILCHQ9H900 591 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 MRPL47Q9HD33 250 aaKnown RBP11.9□□□□□ -0.5
GABPB1-206ENST00000543881 LOXL2Q9Y4K0 774 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 UNC13CQ8NB66 2214 aa11.9□□□□□ -0.5
GABPB1-206ENST00000543881 A0A1W2PQJ5 194 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 TMEM110-MUSTN1A8MSY1 372 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 A8MX80 341 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 H3BRJ5 948 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 AGRPO00253 132 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 MAFKO60675 156 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 RECQL5O94762 991 aaPredicted RBP11.89□□□□□ -0.51
GABPB1-206ENST00000543881 WT1P19544 449 aaPredicted RBP11.89□□□□□ -0.51
GABPB1-206ENST00000543881 ITIH1P19827 911 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 CR2P20023 1033 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 ZNF135P52742 658 aaPredicted RBP11.89□□□□□ -0.51
GABPB1-206ENST00000543881 BCL2L1Q07817 233 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 UBAP2LQ14157 1087 aaKnown RBP11.89□□□□□ -0.51
GABPB1-206ENST00000543881 CLCA4Q14CN2 919 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 ELOCQ15369 112 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 BOLA3Q53S33 107 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 TDRD12Q587J7 1177 aaKnown RBP11.89□□□□□ -0.51
GABPB1-206ENST00000543881 TMCO4Q5TGY1 634 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 LVRNQ6Q4G3 990 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 RD3Q7Z3Z2 195 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 ZFAND4Q86XD8 727 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 LZTR1Q8N653 840 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 HTR3CQ8WXA8 447 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 LRRN3Q9H3W5 708 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 PCDH18Q9HCL0 1135 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.89□□□□□ -0.51
GABPB1-206ENST00000543881 GEMIN8Q9NWZ8 242 aaKnown RBP11.89□□□□□ -0.51
GABPB1-206ENST00000543881 PCDHB11Q9Y5F2 797 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 A0A087X0T9 212 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 CFAP69A5D8W1 941 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 TMEM202A6NGA9 273 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 RASGRP1O95267 797 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 ALPIP09923 528 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 FAM228BP0C875 321 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 CTSEP14091 401 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 IL4RP24394 825 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 BLKP51451 505 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 SRP54P61011 504 aaKnown RBP11.89□□□□□ -0.51
GABPB1-206ENST00000543881 AP1S1P61966 158 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 SLC25A11Q02978 314 aaKnown RBP11.89□□□□□ -0.51
GABPB1-206ENST00000543881 MTM1Q13496 603 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 PIGHQ14442 188 aaPredicted RBP11.89□□□□□ -0.51
GABPB1-206ENST00000543881 PTPRRQ15256 657 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 TMCO3Q6UWJ1 677 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 DPPA4Q7L190 304 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 CPNE8Q86YQ8 564 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 NIPA2Q8N8Q9 360 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 CPLX3Q8WVH0 158 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 OR1E3Q8WZA6 343 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 SYN2Q92777 582 aaPredicted RBP11.89□□□□□ -0.51
GABPB1-206ENST00000543881 PDXPQ96GD0 296 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 ZNF599Q96NL3 588 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 FOXJ2Q9P0K8 574 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 B4GALT6Q9UBX8 382 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 CAPN11Q9UMQ6 739 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 GPR34Q9UPC5 381 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 PCDHGC4Q9Y5F7 938 aa11.89□□□□□ -0.51
GABPB1-206ENST00000543881 HTRA2O43464 458 aaPredicted RBP11.88□□□□□ -0.51
GABPB1-206ENST00000543881 SERPING1P05155 500 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 CYP1A2P05177 515 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 CD48P09326 243 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 ELFN1P0C7U0 828 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 GP1BBP13224 206 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 HTR1BP28222 390 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 TRIM23P36406 574 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 ARL4AP40617 200 aa11.88□□□□□ -0.51
GABPB1-206ENST00000543881 ETV5P41161 510 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms