RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TNFP01375 233 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PCCBP05166 539 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PDHA1P08559 390 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CKMT1AP12532 417 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 JUPP14923 745 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 GM2AP17900 193 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CA4P22748 312 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TRIM23P36406 574 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 DSC2Q02487 901 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PPIDQ08752 370 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 AP1B1Q10567 949 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ARHGEF7Q14155 803 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TFDP2Q14188 446 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 NFATC4Q14934 902 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PDK1Q15118 436 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TAZQ16635 292 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 KIF26BQ2KJY2 2108 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ALG1LQ6GMV1 187 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PNCKQ6P2M8 343 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 MFSD7Q6UXD7 560 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PHACTR4Q8IZ21 702 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 RCOR2Q8IZ40 523 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SPC24Q8NBT2 197 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PLA2G15Q8NCC3 412 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ZNF548Q8NEK5 533 aaPredicted RBP9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ARRDC2Q8TBH0 407 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 APOLD1Q96LR9 279 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 COQ10AQ96MF6 247 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 WDR92Q96MX6 357 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 IL12RB2Q99665 862 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 USP29Q9HBJ7 922 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 IMPACTQ9P2X3 320 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SALL4Q9UJQ4 1053 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 OR1A2Q9Y585 309 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ANKRD11Q6UB99 2663 aaPredicted RBP9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SOWAHDA6NJG2 315 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 LMO7DNF2Z398 122 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PSMD11O00231 422 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CACNB4O00305 520 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PDE2AO00408 941 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PPP1R12AO14974 1030 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 YY2O15391 372 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 GCATO75600 419 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 RASGRP1O95267 797 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 IPO7O95373 1038 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 HLA-DQB2P05538 268 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PTMAP06454 111 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ANXA6P08133 673 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CTSEP14091 401 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CTPS1P17812 591 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 KELP23276 732 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 HNF1BP35680 557 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CDKN2BP42772 138 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 NR2C2P49116 596 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 HK3P52790 923 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 EPHB1P54762 984 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SRP54P61011 504 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 RPL26P61254 145 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 IFI35P80217 286 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 NIPAL4Q0D2K0 466 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 C1orf61Q13536 156 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 IHHQ14623 411 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ELOCQ15369 112 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CNGA3Q16281 694 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PRRT3Q5FWE3 981 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 DENND2CQ68D51 928 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ZCCHC8Q6NZY4 707 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 LVRNQ6Q4G3 990 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 NPNTQ6UXI9 565 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SPOCD1Q6ZMY3 1216 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 USP45Q70EL2 814 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 HID1Q8IV36 788 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 KATNAL2Q8IYT4 538 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 RBFAQ8N0V3 343 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CACTIN-AS1Q8N1I8 211 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SDR16C5Q8N3Y7 309 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 FSTL5Q8N475 847 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SCG3Q8WXD2 468 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 GLMNQ92990 594 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TSACCQ96A04 125 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 FUBP1Q96AE4 644 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 MCCC1Q96RQ3 725 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PRR14Q9BWN1 585 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TCEAL2Q9H3H9 227 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 NCKIPSDQ9NZQ3 722 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 APOBEC3BQ9UH17 382 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PNMA8BQ9ULN7 279 aaPredicted RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 RPL26L1Q9UNX3 145 aaKnown RBP9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TFR2Q9UP52 801 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CHKBQ9Y259 395 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TTLL3Q9Y4R7 772 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ASPMQ8IZT6 3477 aa9.74□□□□□ -0.85
TNFRSF1A-214ENST00000543048 A0A0J9YYE9 177 aa9.73□□□□□ -0.85
TNFRSF1A-214ENST00000543048 FAM149AA5PLN7 773 aa9.73□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TRABD2BA6NFA1 517 aa9.73□□□□□ -0.85
TNFRSF1A-214ENST00000543048 NPIPB15A6NHN6 443 aaPredicted RBP9.73□□□□□ -0.85
TNFRSF1A-214ENST00000543048 BTNL10A8MVZ5 291 aa9.73□□□□□ -0.85
TNFRSF1A-214ENST00000543048 KCNK1O00180 336 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms