RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 SRD5A1P18405 259 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 TYMPP19971 482 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 TNFSF4P23510 183 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 SERPINA4P29622 427 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 RYKP34925 604 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 DDIT3P35638 169 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 AARSP49588 968 aaKnown RBP eCLIP0.76□□□□□ -2.294e-7■□□□□ 11.3
COPB1-212ENST00000534771 ISL1P61371 349 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 KCNJ10P78508 379 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 RPL24P83731 157 aaKnown RBP0.76□□□□□ -2.29
COPB1-212ENST00000534771 GALEQ14376 348 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 SAFBQ15424 915 aaKnown RBP eCLIP0.76□□□□□ -2.29
COPB1-212ENST00000534771 CCDC96Q2M329 555 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 EDRF1Q3B7T1 1238 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 KIAA1644Q3SXP7 199 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 FBXO43Q4G163 708 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 ESCO2Q56NI9 601 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 TECRLQ5HYJ1 363 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 FAM171BQ6P995 826 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 GJB7Q6PEY0 223 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 DOK6Q6PKX4 331 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 IL20RBQ6UXL0 311 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 SLC36A4Q6YBV0 504 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 RAPH1Q70E73 1250 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 TAOK1Q7L7X3 1001 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 PRSS45Q7RTY3 260 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 CHD1LQ86WJ1 897 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 TMTC1Q8IUR5 882 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 CCDC117Q8IWD4 279 aaPredicted RBP0.76□□□□□ -2.29
COPB1-212ENST00000534771 FOXRED2Q8IWF2 684 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 RAVER1Q8IY67 606 aaKnown RBP0.76□□□□□ -2.29
COPB1-212ENST00000534771 PARP16Q8N5Y8 322 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 FSIP1Q8NA03 581 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 SCCPDHQ8NBX0 429 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 AGBL3Q8NEM8 1001 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 DNAAF1Q8NEP3 725 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 ZPLD1Q8TCW7 415 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 IPO4Q8TEX9 1081 aaKnown RBP0.76□□□□□ -2.29
COPB1-212ENST00000534771 HSPH1Q92598 858 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 MUL1Q969V5 352 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 ARHGEF26Q96DR7 871 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 GMPPAQ96IJ6 420 aaPredicted RBP0.76□□□□□ -2.29
COPB1-212ENST00000534771 ZNF570Q96NI8 536 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 MTERF1Q99551 399 aaKnown RBP0.76□□□□□ -2.29
COPB1-212ENST00000534771 MYD88Q99836 296 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 NEURL2Q9BR09 285 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 RAD21L1Q9H4I0 556 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 ELAC1Q9H777 363 aaKnown RBP0.76□□□□□ -2.29
COPB1-212ENST00000534771 DDX21Q9NR30 783 aaKnown RBP eCLIP0.76□□□□□ -2.29
COPB1-212ENST00000534771 TMLHEQ9NVH6 421 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 BABAM1Q9NWV8 329 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 ADPRHL2Q9NX46 363 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 CISD1Q9NZ45 108 aaKnown RBP0.76□□□□□ -2.29
COPB1-212ENST00000534771 KLHL8Q9P2G9 620 aaPredicted RBP0.76□□□□□ -2.29
COPB1-212ENST00000534771 KLHL42Q9P2K6 505 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 POLG2Q9UHN1 485 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 TINAGQ9UJW2 476 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 SLC39A10Q9ULF5 831 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP0.76□□□□□ -2.291e-15■□□□□ 8.8
COPB1-212ENST00000534771 DAPP1Q9UN19 280 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 DLGAP4Q9Y2H0 992 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 OR2W1Q9Y3N9 320 aa0.76□□□□□ -2.29
COPB1-212ENST00000534771 COL16A1Q07092 1604 aaPredicted RBP0.75□□□□□ -2.29
COPB1-212ENST00000534771 SOS1Q07889 1333 aaPredicted RBP0.75□□□□□ -2.29
COPB1-212ENST00000534771 ADGRF5Q8IZF2 1346 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 hCG_2014768A0A024R1R8 64 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 IGLV7-46A0A075B6I9 117 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 DUXAA6NLW8 204 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 ZNHIT1O43257 154 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 CTSVO60911 334 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 TCEA3O75764 348 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 ADAP00813 363 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 MMP2P08253 660 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 CYP21A2P08686 494 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 G6PDP11413 515 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 PCNAP12004 261 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 ITGAXP20702 1163 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 CHATP28329 748 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 CORO1AP31146 461 aaKnown RBP0.75□□□□□ -2.29
COPB1-212ENST00000534771 PNPLA4P41247 253 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 HSPA7P48741 367 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 AMPHP49418 695 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 PGFP49763 221 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 HLCSP50747 726 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 RAD23BP54727 409 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 NR1H2P55055 460 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 RPP30P78346 268 aaKnown RBP0.75□□□□□ -2.29
COPB1-212ENST00000534771 DLK1P80370 383 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 PPARDQ03181 441 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 RUNX2Q13950 521 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 ZNF234Q14588 700 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 MPEG1Q2M385 716 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 GALNTL6Q49A17 601 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 ZC2HC1CQ53FD0 456 aaPredicted RBP0.75□□□□□ -2.29
COPB1-212ENST00000534771 TMEM35AQ53FP2 167 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 KRTCAP3Q53RY4 240 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 ODR4Q5SWX8 454 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 DGAT2L7PQ6IED9 249 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 OR7E24Q6IFN5 339 aa0.75□□□□□ -2.29
COPB1-212ENST00000534771 FAM166AQ6J272 317 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms