RNA–Protein interactions for RNA: ENST00000467996.1

RNF13-208, Transcript of ring finger protein 13, humanhuman

TSL 5

Gene RNF13, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13-208ENST00000467996 TMEM135Q86UB9 458 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 KBTBD6Q86V97 674 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 OR13C4Q8NGS5 318 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 OR13J1Q8NGT2 312 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 GANCQ8TET4 914 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 EID2BQ96D98 161 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 MFSD3Q96ES6 412 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 DNAJC1Q96KC8 554 aaKnown RBP11.86□□□□□ -0.51
RNF13-208ENST00000467996 TTC25Q96NG3 672 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 COL25A1Q9BXS0 654 aaPredicted RBP11.86□□□□□ -0.51
RNF13-208ENST00000467996 GPR63Q9BZJ6 419 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 EPB41L4BQ9H329 900 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 ZFYVE1Q9HBF4 777 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 LRRC4CQ9HCJ2 640 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 TREX1Q9NSU2 369 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 USP36Q9P275 1121 aaKnown RBP11.86□□□□□ -0.51
RNF13-208ENST00000467996 SLC2A6Q9UGQ3 507 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 FZD4Q9ULV1 537 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 FADS3Q9Y5Q0 445 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 RPS6KL1Q9Y6S9 549 aa11.86□□□□□ -0.51
RNF13-208ENST00000467996 ZCWPW2A0A1B0GU75 182 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 C2orf81A6NN90 581 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 SLC7A4O43246 635 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 RIPK2O43353 540 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 PLRG1O43660 514 aaKnown RBP11.85□□□□□ -0.51
RNF13-208ENST00000467996 AP1G1O43747 822 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 ALDH1A2O94788 518 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 PAPSS2O95340 614 aaPredicted RBP11.85□□□□□ -0.51
RNF13-208ENST00000467996 ACSL3O95573 720 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 APBB3O95704 486 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 TTC4O95801 387 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 POLBP06746 335 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 ELFN1P0C7U0 828 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 TSHRP16473 764 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 LPOP22079 712 aaPredicted RBP11.85□□□□□ -0.51
RNF13-208ENST00000467996 HMGCLP35914 325 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 CCR3P51677 355 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 STC1P52823 247 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 ADPRHP54922 357 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 PDE1BQ01064 536 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 PTSQ03393 145 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 ACVR1Q04771 509 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 CCDC15Q0P6D6 951 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 PTPRCAPQ14761 206 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 UAP1Q16222 522 aaPredicted RBP11.85□□□□□ -0.51
RNF13-208ENST00000467996 TMEM52BQ4KMG9 183 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 ANKRD20A4Q4UJ75 823 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 SPANXN3Q5MJ09 141 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 ESRP1Q6NXG1 681 aaKnown RBP11.85□□□□□ -0.51
RNF13-208ENST00000467996 RASSF3Q86WH2 238 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 PALM2Q8IXS6 379 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 PGBD3Q8N328 593 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 MREGQ8N565 214 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.85□□□□□ -0.51
RNF13-208ENST00000467996 OR4K2Q8NGD2 314 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 GSDMBQ8TAX9 411 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 STYXQ8WUJ0 223 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 UBLCP1Q8WVY7 318 aaPredicted RBP11.85□□□□□ -0.51
RNF13-208ENST00000467996 PEX13Q92968 403 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 PBXIP1Q96AQ6 731 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 FCRL3Q96P31 734 aaPredicted RBP11.85□□□□□ -0.51
RNF13-208ENST00000467996 WRAP53Q9BUR4 548 aaKnown RBP11.85□□□□□ -0.51
RNF13-208ENST00000467996 VPS37BQ9H9H4 285 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 NLE1Q9NVX2 485 aaPredicted RBP11.85□□□□□ -0.51
RNF13-208ENST00000467996 IL17CQ9P0M4 197 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 RIMKLBQ9ULI2 386 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 NCKAP1Q9Y2A7 1128 aa11.85□□□□□ -0.51
RNF13-208ENST00000467996 H0Y858 1186 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 TNFRSF10AO00220 468 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 PSMD11O00231 422 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 CCL22O00626 93 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 NEMP1O14524 444 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 STX7O15400 261 aaKnown RBP11.84□□□□□ -0.51
RNF13-208ENST00000467996 SPAG6O75602 509 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 RPP40O75818 363 aaKnown RBP11.84□□□□□ -0.51
RNF13-208ENST00000467996 IGLV3-19P01714 112 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 GSTA2P09210 222 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 PSMA3P25788 255 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 HSD17B3P37058 310 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 CXCL12P48061 93 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 LIG3P49916 1009 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 TPMTP51580 245 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 ARSDP51689 593 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 CLCN5P51795 746 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 TMPRSS15P98073 1019 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 SFSWAPQ12872 951 aaKnown RBP11.84□□□□□ -0.51
RNF13-208ENST00000467996 SMAD1Q15797 465 aaKnown RBP11.84□□□□□ -0.51
RNF13-208ENST00000467996 SPDYCQ5MJ68 293 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 KIAA0930Q6ICG6 404 aaPredicted RBP11.84□□□□□ -0.51
RNF13-208ENST00000467996 LIPIQ6XZB0 460 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 MICALCLQ6ZW33 695 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 HSD11B1LQ7Z5J1 315 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 FAM124AQ86V42 546 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 CXorf40AQ8TE69 158 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 ANKRD7Q92527 254 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 TPSD1Q9BZJ3 242 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 BPIFA1Q9NP55 256 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 ARFGAP3Q9NP61 516 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 ITM2CQ9NQX7 267 aa11.84□□□□□ -0.51
RNF13-208ENST00000467996 IL1RAPL1Q9NZN1 696 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms