RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	DNAJC28	Q9NX36	388 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	CLCA2	Q9UQC9	943 aa		12.77	□□□□□ -0.37
FDPS-204	ENST00000461507	GOLGA6L9	A6NEM1	432 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	MIF4GD	A9UHW6	222 aa	Known RBP	12.76	□□□□□ -0.37
FDPS-204	ENST00000461507		F5H423	210 aa	Predicted RBP	12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	PEX11B	O96011	259 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	HOXB3	P14651	431 aa	Predicted RBP	12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	TIMP2	P16035	220 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	CA4	P22748	312 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	NFKBIA	P25963	317 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	NR2C2	P49116	596 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	YPEL5	P62699	121 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	POLR2L	P62875	67 aa	Known RBP	12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	DAB2	P98082	770 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	ZBTB17	Q13105	803 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	EIF2B5	Q13144	721 aa	Known RBP	12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	PDE1C	Q14123	709 aa	Predicted RBP	12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	AGER	Q15109	404 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	PPP2R5E	Q16537	467 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	UGP2	Q16851	508 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	TMEM52B	Q4KMG9	183 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	HS1BP3	Q53T59	392 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	ARMC12	Q5T9G4	340 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	SEL1L2	Q5TEA6	688 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	ZCCHC8	Q6NZY4	707 aa	Known RBP	12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	AADACL2	Q6P093	401 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	RNF10	Q8N5U6	811 aa	Known RBP	12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	TP53I13	Q8NBR0	393 aa	Predicted RBP	12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	TSGA13	Q96PP4	275 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	FAM118B	Q9BPY3	351 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	C1QTNF7	Q9BXJ2	289 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	OSBPL8	Q9BZF1	889 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	NCKIPSD	Q9NZQ3	722 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	KLHL8	Q9P2G9	620 aa	Predicted RBP	12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	KLF15	Q9UIH9	416 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	ATP8A1	Q9Y2Q0	1164 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	COQ6	Q9Y2Z9	468 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	BAHCC1	Q9P281	2608 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	RP1	P56715	2156 aa		12.76	□□□□□ -0.37
FDPS-204	ENST00000461507	NBEA	Q8NFP9	2946 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	TPP1	O14773	563 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	AQP9	O43315	295 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	TLX3	O43711	291 aa	Predicted RBP	12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	OPA1	O60313	960 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	SOCS5	O75159	536 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	TM7SF2	O76062	418 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	MT-CO3	P00414	261 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	ELFN1	P0C7U0	828 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	CTPS1	P17812	591 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	EIF2S3	P41091	472 aa	Known RBP	12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	CD86	P42081	329 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	TNNT3	P45378	269 aa	Predicted RBP	12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	DUSP3	P51452	185 aa	Predicted RBP	12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	COPS2	P61201	443 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	ADCY2	Q08462	1091 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	TRAF2	Q12933	501 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	PCSK7	Q16549	785 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	ZNF542P	Q5EBM4	170 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	KDM7A	Q6ZMT4	941 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	MACC1	Q6ZN28	852 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	ZSWIM9	Q86XI8	627 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	NDUFAF2	Q8N183	169 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	LPCAT1	Q8NF37	534 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	MAML1	Q92585	1016 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	ALG3	Q92685	438 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	FERMT1	Q9BQL6	677 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	BRD8	Q9H0E9	1235 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	EVA1B	Q9NVM1	165 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	PPP2R2C	Q9Y2T4	447 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	RAI2	Q9Y5P3	530 aa		12.75	□□□□□ -0.37
FDPS-204	ENST00000461507	GOLGA6C	A6NDK9	693 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	GOLGA6B	A6NDN3	693 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	TJP3	O95049	919 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	PCCB	P05166	539 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	GOLGA6D	P0CG33	693 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	PYGM	P11217	842 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	CYP2A6	P11509	494 aa	Predicted RBP	12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	C6	P13671	934 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	MMP12	P39900	470 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	LIG3	P49916	1009 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	EIF3E	P60228	445 aa	Known RBP	12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	OTUD4	Q01804	1114 aa	Known RBP	12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	ARHGEF7	Q14155	803 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	PTK2B	Q14289	1009 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	ACOX1	Q15067	660 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	RALGPS1	Q5JS13	557 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	BBS12	Q6ZW61	710 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	USP45	Q70EL2	814 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	KDELC2	Q7Z4H8	507 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	CDKL3	Q8IVW4	592 aa	Predicted RBP	12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	TEX26	Q8N6G2	289 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	BTN2A2	Q8WVV5	523 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	HNRNPLL	Q8WVV9	542 aa	Known RBP	12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	SPOCK2	Q92563	424 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	ECHDC3	Q96DC8	303 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	OLFM3	Q96PB7	478 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	LRRC61	Q9BV99	259 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	BOC	Q9BWV1	1114 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	GOLGA6A	Q9NYA3	693 aa		12.74	□□□□□ -0.37
FDPS-204	ENST00000461507	SPAST	Q9UBP0	616 aa		12.74	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms