RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.94■□□□□ 0.62
COL5A1-203ENST00000460264 TC2NQ8N9U0 490 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 OR56A4Q8NGH8 313 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 MAPK15Q8TD08 544 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 GLMNQ92990 594 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 DTD2Q96FN9 168 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 ZNF830Q96NB3 372 aaPredicted RBP18.94■□□□□ 0.62
COL5A1-203ENST00000460264 RBM15Q96T37 977 aaKnown RBP eCLIP18.94■□□□□ 0.62
COL5A1-203ENST00000460264 ABCG4Q9H172 646 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 HAUS2Q9NVX0 235 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 TTLL3Q9Y4R7 772 aa18.94■□□□□ 0.62
COL5A1-203ENST00000460264 CELSR3Q9NYQ7 3312 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 CTPS1P17812 591 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 KELP23276 732 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 ETV3P41162 512 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 PERM1Q5SV97 790 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 LVRNQ6Q4G3 990 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 KYQ8NBH2 561 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 CCNYQ8ND76 341 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 TPCN2Q8NHX9 752 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 ARRDC2Q8TBH0 407 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 NAT6Q93015 286 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 DEPDC7Q96QD5 511 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 LGR4Q9BXB1 951 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 KCTD5Q9NXV2 234 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 RALYQ9UKM9 306 aaKnown RBP18.93■□□□□ 0.62
COL5A1-203ENST00000460264 DOLKQ9UPQ8 538 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 PCDHB1Q9Y5F3 818 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 AK5Q9Y6K8 562 aa18.93■□□□□ 0.62
COL5A1-203ENST00000460264 TNFRSF10CO14798 259 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 TNFP01375 233 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 KRT1P04264 644 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 MYCLP1P12525 358 aaPredicted RBP18.92■□□□□ 0.62
COL5A1-203ENST00000460264 TGM2P21980 687 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 CES1P23141 567 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 SLC1A1P43005 524 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 PPIDQ08752 370 aaKnown RBP18.92■□□□□ 0.62
COL5A1-203ENST00000460264 NIPAL4Q0D2K0 466 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 ARHGEF7Q14155 803 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 SLC9A4Q6AI14 798 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 Q6ZVL8 140 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 HEATR4Q86WZ0 1026 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 GKN2Q86XP6 184 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 CCDC13Q8IYE1 715 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 ARL10Q8N8L6 244 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 SCG3Q8WXD2 468 aaKnown RBP18.92■□□□□ 0.62
COL5A1-203ENST00000460264 SMIM14Q96QK8 99 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 LGMNQ99538 433 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 TDRD1Q9BXT4 1180 aaKnown RBP18.92■□□□□ 0.62
COL5A1-203ENST00000460264 MRPL40Q9NQ50 206 aaKnown RBP18.92■□□□□ 0.62
COL5A1-203ENST00000460264 PADI4Q9UM07 663 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 HEY1Q9Y5J3 304 aa18.92■□□□□ 0.62
COL5A1-203ENST00000460264 ARHGEF17Q96PE2 2063 aaPredicted RBP18.91■□□□□ 0.62
COL5A1-203ENST00000460264 LAMA5O15230 3695 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 A0A0J9YYE9 177 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 A0A0U1RQS6 177 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 KCNK1O00180 336 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 PDE2AO00408 941 aaPredicted RBP18.91■□□□□ 0.62
COL5A1-203ENST00000460264 APOL1O14791 398 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 CSO75390 466 aaKnown RBP18.91■□□□□ 0.62
COL5A1-203ENST00000460264 TRBC1P01850 177 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 KRT10P13645 584 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 LRRC66Q68CR7 880 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 CRTC1Q6UUV9 634 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 RHOT1Q8IXI2 618 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 NDUFAF2Q8N183 169 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.91■□□□□ 0.62
COL5A1-203ENST00000460264 TEX101Q9BY14 249 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 PHPT1Q9NRX4 125 aaPredicted RBP18.91■□□□□ 0.62
COL5A1-203ENST00000460264 SIRPGQ9P1W8 387 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 GPR34Q9UPC5 381 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 HYOU1Q9Y4L1 999 aa18.91■□□□□ 0.62
COL5A1-203ENST00000460264 A0A087WV48 116 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 PRSS38A1L453 326 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 CAPN8A6NHC0 703 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 BRINP1O60477 761 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 PRLP01236 227 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 JCHAINP01591 159 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 COMTP21964 271 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 CA4P22748 312 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 EPHB1P54762 984 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 HADHBP55084 474 aaKnown RBP18.9■□□□□ 0.62
COL5A1-203ENST00000460264 IFI35P80217 286 aaPredicted RBP18.9■□□□□ 0.62
COL5A1-203ENST00000460264 ZBTB17Q13105 803 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 C19orf48Q6RUI8 117 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 RFLNAQ6ZTI6 216 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 TECPR1Q7Z6L1 1165 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 RNF25Q96BH1 459 aaPredicted RBP18.9■□□□□ 0.62
COL5A1-203ENST00000460264 OLFM3Q96PB7 478 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 CCDC3Q9BQI4 270 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 ANP32EQ9BTT0 268 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 TMEM168Q9H0V1 697 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 CYP4F12Q9HCS2 524 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 DDX56Q9NY93 547 aaKnown RBP18.9■□□□□ 0.62
COL5A1-203ENST00000460264 GULP1Q9UBP9 304 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 LHX6Q9UPM6 363 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 CHKBQ9Y259 395 aa18.9■□□□□ 0.62
COL5A1-203ENST00000460264 GOLGA6CA6NDK9 693 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 GOLGA6BA6NDN3 693 aa18.89■□□□□ 0.61
COL5A1-203ENST00000460264 TLX3O43711 291 aaPredicted RBP18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms