RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 TLR10Q9BXR5 811 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 GDF3Q9NR23 364 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 DNAAF2Q9NVR5 837 aaKnown RBP10.11□□□□□ -0.79
RFX3-210ENST00000457373 RSPH14Q9UHP6 348 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 R3HDM2Q9Y2K5 976 aaKnown RBP10.11□□□□□ -0.79
RFX3-210ENST00000457373 PPIL1Q9Y3C6 166 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 PTPRZ1P23471 2315 aaPredicted RBP10.11□□□□□ -0.79
RFX3-210ENST00000457373 ZFHX2Q9C0A1 2572 aaPredicted RBP10.1□□□□□ -0.79
RFX3-210ENST00000457373 NPIPB15A6NHN6 443 aaPredicted RBP10.1□□□□□ -0.79
RFX3-210ENST00000457373 ANKRD66B4E2M5 251 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 CEP104O60308 925 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 PMPCBO75439 489 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 RECQL5O94762 991 aaPredicted RBP10.1□□□□□ -0.79
RFX3-210ENST00000457373 STK10O94804 968 aaKnown RBP10.1□□□□□ -0.79
RFX3-210ENST00000457373 HEXIM1O94992 359 aaKnown RBP10.1□□□□□ -0.79
RFX3-210ENST00000457373 LHCGRP22888 699 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 CXCR5P32302 372 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 CDK18Q07002 472 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 OVGP1Q12889 678 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 BNIP3Q12983 259 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 KLF1Q13351 362 aaPredicted RBP10.1□□□□□ -0.79
RFX3-210ENST00000457373 PDE1CQ14123 709 aaPredicted RBP10.1□□□□□ -0.79
RFX3-210ENST00000457373 LRRC14Q15048 493 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 IRF4Q15306 451 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 CNGA3Q16281 694 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 WSCD2Q2TBF2 565 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 ZNF542PQ5EBM4 170 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 ANKRD20A2Q5SQ80 823 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 ANKRD20A1Q5TYW2 823 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 ANKRD20A3Q5VUR7 823 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 CCDC70Q6NSX1 233 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 CRTC1Q6UUV9 634 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 KYAT3Q6YP21 454 aaKnown RBP10.1□□□□□ -0.79
RFX3-210ENST00000457373 ABI3BPQ7Z7G0 1075 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 CCDC110Q8TBZ0 833 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 C1orf54Q8WWF1 131 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 FCRL5Q96RD9 977 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 MLPHQ9BV36 600 aaPredicted RBP10.1□□□□□ -0.79
RFX3-210ENST00000457373 CARD9Q9H257 536 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 DLL3Q9NYJ7 618 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 FAM153AQ9UHL3 310 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 TRHDEQ9UKU6 1024 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 DNPEPQ9ULA0 475 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 PYCARDQ9ULZ3 195 aa10.1□□□□□ -0.79
RFX3-210ENST00000457373 FNDC3AQ9Y2H6 1198 aaKnown RBP10.1□□□□□ -0.79
RFX3-210ENST00000457373 A0A1B0GTQ1 180 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 USP27XA6NNY8 438 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 TM4SF5O14894 197 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 SH3BP5O60239 455 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 DKK1O94907 266 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 CLDN7O95471 211 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 PIRTP0C851 137 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 CD59P13987 128 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 GM2AP17900 193 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 ETV3P41162 512 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 RABIFP47224 123 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 CCT8P50990 548 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 MMP16P51512 607 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 THOP1P52888 689 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 EMP3P54852 163 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 RPL26P61254 145 aaKnown RBP10.09□□□□□ -0.79
RFX3-210ENST00000457373 SNX1Q13596 522 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 PRPSAP1Q14558 356 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 INPP5AQ14642 412 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 SUZ12Q15022 739 aaKnown RBP10.09□□□□□ -0.79
RFX3-210ENST00000457373 AGERQ15109 404 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 SHBQ15464 509 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 LONRF2Q1L5Z9 754 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 SWI5Q1ZZU3 235 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 TPRG1LQ5T0D9 272 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 LRRC66Q68CR7 880 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 ITPRIPL1Q6GPH6 555 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 ADGRD1Q6QNK2 874 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 KDELC1Q6UW63 502 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 HSD11B1LQ7Z5J1 315 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 GATAD2AQ86YP4 633 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 DCP2Q8IU60 420 aaKnown RBP10.09□□□□□ -0.79
RFX3-210ENST00000457373 SLC22A18ASQ8N1D0 253 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 SLC25A41Q8N5S1 370 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 PLA2G15Q8NCC3 412 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 DEFB124Q8NES8 71 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 IPMKQ8NFU5 416 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 SLC35B2Q8TB61 432 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 SETD7Q8WTS6 366 aaKnown RBP10.09□□□□□ -0.79
RFX3-210ENST00000457373 ATG4AQ8WYN0 398 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 TADA1Q96BN2 335 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 NUS1Q96E22 293 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 COQ10AQ96MF6 247 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 MCCC1Q96RQ3 725 aaPredicted RBP10.09□□□□□ -0.79
RFX3-210ENST00000457373 TMEM121Q9BTD3 319 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 APOOQ9BUR5 198 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 ADGRE3Q9BY15 652 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 CAAP1Q9H8G2 361 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 USP29Q9HBJ7 922 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 CD84Q9UIB8 345 aa10.09□□□□□ -0.79
RFX3-210ENST00000457373 RPL26L1Q9UNX3 145 aaKnown RBP10.09□□□□□ -0.79
RFX3-210ENST00000457373 EP300Q09472 2414 aaPredicted RBP10.09□□□□□ -0.79
RFX3-210ENST00000457373 RIF1Q5UIP0 2472 aaKnown RBP10.08□□□□□ -0.8
RFX3-210ENST00000457373 MYO15AQ9UKN7 3530 aa10.08□□□□□ -0.8
RFX3-210ENST00000457373 C1orf232A0A0U1RR37 186 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms