RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 RASA4BC9J798 803 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 BIN1O00499 593 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 RASA4O43374 803 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 MAP4P27816 1152 aaKnown RBP17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 RAB15P59190 212 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 NOMO3P69849 1222 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 TSR1Q2NL82 804 aaKnown RBP17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 AFMIDQ63HM1 303 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 CAPRIN2Q6IMN6 1127 aaKnown RBP17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 TMEM71Q6P5X7 295 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 PHLDB2Q86SQ0 1253 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 ELOA2Q8IYF1 753 aaPredicted RBP17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 JOSD2Q8TAC2 188 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 STARD8Q92502 1023 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 ECHDC3Q96DC8 303 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 NSMCE3Q96MG7 304 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 CTRCQ99895 268 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 FRMD8Q9BZ67 464 aaPredicted RBP17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 SUDS3Q9H7L9 328 aaPredicted RBP17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 ATP6V1DQ9Y5K8 247 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 MRPS18BQ9Y676 258 aaKnown RBP17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 KCNMB2Q9Y691 235 aa17.2■□□□□ 0.34
UBE2D4-209ENST00000454428 C2CD4BA6NLJ0 364 aa17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 ENO4A6NNW6 628 aa17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 TEX33O43247 280 aa17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 MYCLP1P12525 358 aaPredicted RBP17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 F8A1P23610 371 aa17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 MC2RQ01718 297 aa17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 GRM3Q14832 879 aa17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 CRTC2Q53ET0 693 aaPredicted RBP17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 SLC30A9Q6PML9 568 aa17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 NOP9Q86U38 636 aaKnown RBP17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 NRSN1Q8IZ57 195 aa17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 TEX101Q9BY14 249 aa17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 GSDMCQ9BYG8 508 aa17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 PDCL3Q9H2J4 239 aa17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 APMAPQ9HDC9 416 aa17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 TRNAU1APQ9NX07 287 aaKnown RBP17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 HOOK1Q9UJC3 728 aaKnown RBP17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 TMEM184BQ9Y519 407 aaPredicted RBP17.19■□□□□ 0.34
UBE2D4-209ENST00000454428 SHANK1Q9Y566 2161 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 J3KR12 359 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 AGFG2O95081 481 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 LSM8O95777 96 aaKnown RBP17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 DLGAP3O95886 979 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 ELFN1P0C7U0 828 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 GNLYP22749 145 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 GNPDA1P46926 289 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 YBEYP58557 167 aaPredicted RBP17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 BPIFB4P59827 614 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 CTBSQ01459 385 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 ABHD18Q0P651 414 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 ILF3Q12906 894 aaKnown RBP eCLIP17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 NAA35Q5VZE5 725 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 DPPA4Q7L190 304 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 STRADAQ7RTN6 431 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 NTAN1Q96AB6 310 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 KIAA1143Q96AT1 154 aaPredicted RBP17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 COQ10AQ96MF6 247 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 TEFMQ96QE5 360 aaKnown RBP17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 TUBGCP5Q96RT8 1024 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 UBA2Q9UBT2 640 aaPredicted RBP17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 SUFUQ9UMX1 484 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 PLEKHM1Q9Y4G2 1056 aa17.18■□□□□ 0.34
UBE2D4-209ENST00000454428 WASH4PA8MWX3 477 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 A8MX80 341 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 ZW10O43264 779 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 SEMA7AO75326 666 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 PDGFAP04085 211 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 MMEP08473 750 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 FURINP09958 794 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 EPHB2P29323 1055 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 SDC4P31431 198 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 PTPN9P43378 593 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 POLD2P49005 469 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 PARP15Q460N3 678 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 CFAP58Q5T655 872 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 TCTN3Q6NUS6 607 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 C16orf46Q6P387 395 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 ARHGAP22Q7Z5H3 698 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 HEATR4Q86WZ0 1026 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 ZNF761Q86XN6 746 aaPredicted RBP17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 UMODL1-AS1Q8N2C9 162 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 TSEN2Q8NCE0 465 aaKnown RBP17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 DPYSL5Q9BPU6 564 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 EFHD1Q9BUP0 239 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 HIVEP3Q5T1R4 2406 aa17.17■□□□□ 0.34
UBE2D4-209ENST00000454428 ZNF106Q9H2Y7 1883 aaKnown RBP17.16■□□□□ 0.34
UBE2D4-209ENST00000454428 TRAFD1O14545 582 aaPredicted RBP17.16■□□□□ 0.34
UBE2D4-209ENST00000454428 STK17BO94768 372 aa17.16■□□□□ 0.34
UBE2D4-209ENST00000454428 TCN2P20062 427 aa17.16■□□□□ 0.34
UBE2D4-209ENST00000454428 ADCY8P40145 1251 aa17.16■□□□□ 0.34
UBE2D4-209ENST00000454428 STAT5AP42229 794 aa17.16■□□□□ 0.34
UBE2D4-209ENST00000454428 CSNK1DP48730 415 aa17.16■□□□□ 0.34
UBE2D4-209ENST00000454428 SEPT6Q14141 434 aa17.16■□□□□ 0.34
UBE2D4-209ENST00000454428 SRLQ86TD4 932 aa17.16■□□□□ 0.34
UBE2D4-209ENST00000454428 CREBRFQ8IUR6 639 aa17.16■□□□□ 0.34
UBE2D4-209ENST00000454428 TEX19Q8NA77 164 aa17.16■□□□□ 0.34
UBE2D4-209ENST00000454428 FAM172AQ8WUF8 416 aa17.16■□□□□ 0.34
UBE2D4-209ENST00000454428 LRRC19Q9H756 370 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms