RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 NAT6Q93015 286 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 NUS1Q96E22 293 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 DTD2Q96FN9 168 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 DEPDC7Q96QD5 511 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 LGR4Q9BXB1 951 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 TEX101Q9BY14 249 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 FGF22Q9HCT0 170 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 HAUS2Q9NVX0 235 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 RBM22Q9NW64 420 aaKnown RBP eCLIP19.41■□□□□ 0.7
USP40-207ENST00000450940 PADI4Q9UM07 663 aa19.41■□□□□ 0.7
USP40-207ENST00000450940 PDE2AO00408 941 aaPredicted RBP19.4■□□□□ 0.7
USP40-207ENST00000450940 TGM2P21980 687 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 SLC1A1P43005 524 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 DSC2Q02487 901 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 PPIDQ08752 370 aaKnown RBP19.4■□□□□ 0.7
USP40-207ENST00000450940 PERM1Q5SV97 790 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 SLC9A4Q6AI14 798 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 USP45Q70EL2 814 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 RD3Q7Z3Z2 195 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 GKN2Q86XP6 184 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 PLD5Q8N7P1 536 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 TC2NQ8N9U0 490 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 GRAMD1AQ96CP6 724 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 PDXPQ96GD0 296 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 WDR26Q9H7D7 661 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 AK5Q9Y6K8 562 aa19.4■□□□□ 0.7
USP40-207ENST00000450940 ARHGEF17Q96PE2 2063 aaPredicted RBP19.4■□□□□ 0.7
USP40-207ENST00000450940 CELSR3Q9NYQ7 3312 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 A0A0J9YYE9 177 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 LRRD1A4D1F6 860 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 PRLP01236 227 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 TRBC1P01850 177 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 MYCLP1P12525 358 aaPredicted RBP19.39■□□□□ 0.69
USP40-207ENST00000450940 KRT10P13645 584 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 ETV3P41162 512 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 HADHBP55084 474 aaKnown RBP19.39■□□□□ 0.69
USP40-207ENST00000450940 RPL26P61254 145 aaKnown RBP19.39■□□□□ 0.69
USP40-207ENST00000450940 DPTQ07507 201 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 ITKQ08881 620 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 NIPAL4Q0D2K0 466 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 PTPRRQ15256 657 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 Q6ZVL8 140 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 TSPAN33Q86UF1 283 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 NLRP8Q86W28 1048 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 RAVER1Q8IY67 606 aaKnown RBP19.39■□□□□ 0.69
USP40-207ENST00000450940 CCDC13Q8IYE1 715 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 NDUFAF2Q8N183 169 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 ARL10Q8N8L6 244 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 WDR48Q8TAF3 677 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 TDRD1Q9BXT4 1180 aaKnown RBP19.39■□□□□ 0.69
USP40-207ENST00000450940 RPL26L1Q9UNX3 145 aaKnown RBP19.39■□□□□ 0.69
USP40-207ENST00000450940 LHX6Q9UPM6 363 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 DOLKQ9UPQ8 538 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 PCDHB1Q9Y5F3 818 aa19.39■□□□□ 0.69
USP40-207ENST00000450940 TLX3O43711 291 aaPredicted RBP19.38■□□□□ 0.69
USP40-207ENST00000450940 CSO75390 466 aaKnown RBP19.38■□□□□ 0.69
USP40-207ENST00000450940 TCEA3O75764 348 aa19.38■□□□□ 0.69
USP40-207ENST00000450940 LCA5LO95447 670 aa19.38■□□□□ 0.69
USP40-207ENST00000450940 HLA-DQB2P05538 268 aa19.38■□□□□ 0.69
USP40-207ENST00000450940 CTPS1P17812 591 aa19.38■□□□□ 0.69
USP40-207ENST00000450940 IFI35P80217 286 aaPredicted RBP19.38■□□□□ 0.69
USP40-207ENST00000450940 ARHGEF7Q14155 803 aa19.38■□□□□ 0.69
USP40-207ENST00000450940 ISXQ2M1V0 245 aa19.38■□□□□ 0.69
USP40-207ENST00000450940 ZFYVE27Q5T4F4 411 aa19.38■□□□□ 0.69
USP40-207ENST00000450940 OGFOD3Q6PK18 319 aa19.38■□□□□ 0.69
USP40-207ENST00000450940 CRTC1Q6UUV9 634 aa19.38■□□□□ 0.69
USP40-207ENST00000450940 SNIP1Q8TAD8 396 aaKnown RBP19.38■□□□□ 0.69
USP40-207ENST00000450940 MRPL40Q9NQ50 206 aaKnown RBP19.38■□□□□ 0.69
USP40-207ENST00000450940 PHPT1Q9NRX4 125 aaPredicted RBP19.38■□□□□ 0.69
USP40-207ENST00000450940 GPR34Q9UPC5 381 aa19.38■□□□□ 0.69
USP40-207ENST00000450940 BRINP1O60477 761 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 DXOO77932 396 aaKnown RBP19.37■□□□□ 0.69
USP40-207ENST00000450940 JCHAINP01591 159 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 CEACAM5P06731 702 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 ZNF30P17039 623 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 EIF2S3P41091 472 aaKnown RBP19.37■□□□□ 0.69
USP40-207ENST00000450940 PTSQ03393 145 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 TAZQ16635 292 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 HEATR4Q86WZ0 1026 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 RHOT1Q8IXI2 618 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 CNTD1Q8N815 330 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 KYQ8NBH2 561 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 CCNYQ8ND76 341 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 GPR156Q8NFN8 814 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 OR6C4Q8NGE1 309 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 LRRN4Q8WUT4 740 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 ZNF830Q96NB3 372 aaPredicted RBP19.37■□□□□ 0.69
USP40-207ENST00000450940 SMIM14Q96QK8 99 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 LYSMD1Q96S90 227 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 LGMNQ99538 433 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 FRMD8Q9BZ67 464 aaPredicted RBP19.37■□□□□ 0.69
USP40-207ENST00000450940 TRIM5Q9C035 493 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 DDX56Q9NY93 547 aaKnown RBP19.37■□□□□ 0.69
USP40-207ENST00000450940 RALYQ9UKM9 306 aaKnown RBP19.37■□□□□ 0.69
USP40-207ENST00000450940 DNPEPQ9ULA0 475 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 CHKBQ9Y259 395 aa19.37■□□□□ 0.69
USP40-207ENST00000450940 PRSS38A1L453 326 aa19.36■□□□□ 0.69
USP40-207ENST00000450940 NTN3O00634 580 aaPredicted RBP19.36■□□□□ 0.69
USP40-207ENST00000450940 FUCA1P04066 466 aa19.36■□□□□ 0.69
USP40-207ENST00000450940 MMP2P08253 660 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 351.5 ms