RNA–Protein interactions for RNA: ENST00000446833.1

SDCCAG3-206, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 3

Gene SDCCAG3, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-206ENST00000446833 USP53Q70EK8 1073 aa17.21■□□□□ 0.35
SDCCAG3-206ENST00000446833 C17orf82Q86X59 251 aaPredicted RBP17.21■□□□□ 0.35
SDCCAG3-206ENST00000446833 SLITRK4Q8IW52 837 aa17.21■□□□□ 0.35
SDCCAG3-206ENST00000446833 NUS1Q96E22 293 aa17.21■□□□□ 0.35
SDCCAG3-206ENST00000446833 TEX101Q9BY14 249 aa17.21■□□□□ 0.35
SDCCAG3-206ENST00000446833 GSDMCQ9BYG8 508 aa17.21■□□□□ 0.35
SDCCAG3-206ENST00000446833 TRNAU1APQ9NX07 287 aaKnown RBP17.21■□□□□ 0.35
SDCCAG3-206ENST00000446833 AKAP7Q9P0M2 348 aaPredicted RBP17.21■□□□□ 0.35
SDCCAG3-206ENST00000446833 MOSPD1Q9UJG1 213 aa17.21■□□□□ 0.35
SDCCAG3-206ENST00000446833 SCINQ9Y6U3 715 aa17.21■□□□□ 0.35
SDCCAG3-206ENST00000446833 ANKRD36A6QL64 1941 aa17.21■□□□□ 0.35
SDCCAG3-206ENST00000446833 A0A1W2PQC6 194 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 A8MX80 341 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 LRCH4O75427 683 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 CPNE6O95741 557 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 FTLP02792 175 aaPredicted RBP17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 CD82P27701 267 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 TEAD1P28347 426 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 VIPR1P32241 457 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 B4GALNT1Q00973 533 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 ILF3Q12906 894 aaKnown RBP eCLIP17.2■□□□□ 0.343e-6■□□□□ 10.9
SDCCAG3-206ENST00000446833 TGIF1Q15583 401 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 BOLA3Q53S33 107 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 RALGPS1Q5JS13 557 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 ZNF438Q7Z4V0 828 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 PIM3Q86V86 326 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 CBARPQ8N350 705 aaPredicted RBP17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 BBS5Q8N3I7 341 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 CCL4L1Q8NHW4 92 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 TRIM11Q96F44 468 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 NSMCE3Q96MG7 304 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 NUDCD1Q96RS6 583 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 CARS2Q9HA77 564 aaKnown RBP17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 MRPL47Q9HD33 250 aaKnown RBP17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 WDR70Q9NW82 654 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 AIPL1Q9NZN9 384 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 CNOT8Q9UFF9 292 aaKnown RBP17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 PHTF1Q9UMS5 762 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 SCN8AQ9UQD0 1980 aa17.2■□□□□ 0.34
SDCCAG3-206ENST00000446833 HECTD1Q9ULT8 2610 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 PRAMEF33A0A0G2JMD5 474 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 LRRC53A6NM62 1247 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 H3BRJ5 948 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 PSMD11O00231 422 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 PRAMEF10O60809 474 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 HEXIM1O94992 359 aaKnown RBP17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 PEX11BO96011 259 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 CEACAM5P06731 702 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 MYBL1P10243 752 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 CYP2A6P11509 494 aaPredicted RBP17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 ITIH1P19827 911 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 CR2P20023 1033 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 ARL4AP40617 200 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 NR1D2Q14995 579 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 CNGA3Q16281 694 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 ASIC2Q16515 512 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 DPYSL2Q16555 572 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 MAP9Q49MG5 647 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 PHF19Q5T6S3 580 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 TMEM164Q5U3C3 297 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 HEATR4Q86WZ0 1026 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 SFTPA2Q8IWL1 248 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 PELI3Q8N2H9 469 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 ZDHHC1Q8WTX9 485 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 DTD2Q96FN9 168 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 GBP4Q96PP9 640 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 MGME1Q9BQP7 344 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 TRIM7Q9C029 511 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 HAUS4Q9H6D7 363 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 RTN4Q9NQC3 1192 aaKnown RBP17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 SPATS2LQ9NUQ6 558 aaKnown RBP17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 PCDHB11Q9Y5F2 797 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 PCDHGC4Q9Y5F7 938 aa17.19■□□□□ 0.34
SDCCAG3-206ENST00000446833 RHPN2P1A8MT19 583 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 HGSO14964 777 aaPredicted RBP17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 B4GAT1O43505 415 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 CPP00450 1065 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 FGF1P05230 155 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 PRKCIP41743 596 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 GPR3P46089 330 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 MANEAQ5SRI9 462 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 TMCO3Q6UWJ1 677 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 ZNF571Q7Z3V5 609 aaPredicted RBP17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 TMPRSS9Q7Z410 1059 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 POLNQ7Z5Q5 900 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 DTX1Q86Y01 620 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 NRROSQ86YC3 692 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 TP53INP2Q8IXH6 220 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 EXD3Q8N9H8 876 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 ZSCAN1Q8NBB4 408 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 PDCD6IPQ8WUM4 868 aaKnown RBP17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 NSMCE1Q8WV22 266 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 USP7Q93009 1102 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 SCRN2Q96FV2 425 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 FRMD8Q9BZ67 464 aaPredicted RBP17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 NAT10Q9H0A0 1025 aaKnown RBP17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 SEMA6CQ9H3T2 930 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 NOD2Q9HC29 1040 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 TAAR2Q9P1P5 351 aa17.18■□□□□ 0.34
SDCCAG3-206ENST00000446833 TTC24A2A3L6 582 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 271.5 ms