RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 DNASE2BQ8WZ79 361 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 OPTNQ96CV9 577 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 ZBED3Q96IU2 234 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 TEFMQ96QE5 360 aaKnown RBP5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 PLEKHA2Q9HB19 425 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 HYPKQ9NX55 129 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 DBF4Q9UBU7 674 aaPredicted RBP5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 DHDHQ9UQ10 334 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 MAPK8IP3Q9UPT6 1336 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 MED23Q9ULK4 1368 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 ECM29Q5VYK3 1845 aa5.11□□□□□ -1.59
HMGB3P5-201ENST00000428894 CCL15-CCL14A0A0B4J2E2 113 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 TARSL2A2RTX5 802 aaKnown RBP5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 F5H423 210 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 SOX30O94993 753 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 PPP1R3DO95685 299 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 TFRCP02786 760 aaKnown RBP5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 MMP3P08254 477 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 CETPP11597 493 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 ZNF12P17014 697 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 ITGB8P26012 769 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 DPP6P42658 865 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 SEC61A1P61619 476 aaKnown RBP5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 LMOD3Q0VAK6 560 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 KIF5AQ12840 1032 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 BLMHQ13867 455 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 CCL15Q16663 113 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 LRIT3Q3SXY7 679 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 RUNDC3AQ59EK9 446 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 TANGO2Q6ICL3 276 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 CREB3L2Q70SY1 520 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 C16orf82Q7Z2V1 217 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 MYLK4Q86YV6 388 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 TEX45Q8NA69 505 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 CCDC191Q8NCU4 936 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 OR6Y1Q8NGX8 325 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 TMED6Q8WW62 240 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 ANKRD2Q9GZV1 360 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 TXLNGQ9NUQ3 528 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 NAP1L2Q9ULW6 460 aaPredicted RBP5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 RIPOR2Q9Y4F9 1068 aa5.1□□□□□ -1.59
HMGB3P5-201ENST00000428894 SEPT4O43236 478 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 ITM2AO43736 263 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 STRNO43815 780 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 KCNJ13O60928 360 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 CBX6O95503 412 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 PCCAP05165 728 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 HOXB7P09629 217 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 CCL5P13501 91 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 PTMSP20962 102 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 PPP2R1AP30153 589 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 PNPLA4P41247 253 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 PSMC4P43686 418 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 RBM5P52756 815 aaKnown RBP eCLIP5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 RIPK4P57078 832 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 FKBP1AP62942 108 aaKnown RBP5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 TRAF3Q13114 568 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 HDAC1Q13547 482 aaPredicted RBP5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 CCDC38Q502W7 563 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 ZNF628Q5EBL2 1059 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 SPSB3Q6PJ21 355 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 RASGRP2Q7LDG7 609 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 CUZD1Q86UP6 607 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 CACNA2D3Q8IZS8 1091 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 CSGALNACT1Q8TDX6 532 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 U2AF1L4Q8WU68 220 aaKnown RBP5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 FAM216AQ8WUB2 273 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 GOLGA1Q92805 767 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 RTP4Q96DX8 246 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 HERC2P3Q9BVR0 1158 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 MXD3Q9BW11 206 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 LHPPQ9H008 270 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 VEZTQ9HBM0 779 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 PLCB1Q9NQ66 1216 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 MTMR10Q9NXD2 777 aa5.09□□□□□ -1.59
HMGB3P5-201ENST00000428894 DENND3A2RUS2 1198 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 C17orf100A8MU93 164 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 KIF1CO43896 1103 aaKnown RBP5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 DDX58O95786 925 aaKnown RBP5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 MT3P25713 68 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 FOXO1Q12778 655 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 COASYQ13057 564 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 MYBPC2Q14324 1141 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 SMAD1Q15797 465 aaKnown RBP5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 TIGD6Q17RP2 521 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 C9orf50Q5SZB4 431 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 C9orf57Q5W0N0 161 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 FAM109BQ6ICB4 259 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 C17orf99Q6UX52 265 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 ERO1BQ86YB8 467 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 TDHQ8IZJ6 230 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 POF1BQ8WVV4 589 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 TMEM18Q96B42 140 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 PRMT6Q96LA8 375 aaPredicted RBP5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 SLITRK1Q96PX8 696 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 PLEKHF1Q96S99 279 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 MPHOSPH8Q99549 860 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 CD209Q9NNX6 404 aa5.08□□□□□ -1.6
HMGB3P5-201ENST00000428894 CWC25Q9NXE8 425 aaPredicted RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms