RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 ESRP1Q6NXG1 681 aaKnown RBP10.07□□□□□ -0.8
PKP4-203ENST00000411900 FOXR1Q6PIV2 292 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 RAD9BQ6WBX8 426 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 RFLNAQ6ZTI6 216 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 H2AFVQ71UI9 128 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 HSD11B1LQ7Z5J1 315 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 TSPAN33Q86UF1 283 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 TMTC1Q8IUR5 882 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 SFTPA2Q8IWL1 248 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 FSTL5Q8N475 847 aaPredicted RBP10.07□□□□□ -0.8
PKP4-203ENST00000411900 OR56A4Q8NGH8 313 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 CCL4L1Q8NHW4 92 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 GLMNQ92990 594 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 ATXN7L3BQ96GX2 97 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 CCDC3Q9BQI4 270 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 CYP4F12Q9HCS2 524 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 RCOR3Q9P2K3 495 aaPredicted RBP10.07□□□□□ -0.8
PKP4-203ENST00000411900 UVRAGQ9P2Y5 699 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 CD84Q9UIB8 345 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 RABGEF1Q9UJ41 708 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 PHTF1Q9UMS5 762 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 GPR34Q9UPC5 381 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 RAI2Q9Y5P3 530 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 LOC400499M0QZD8 3231 aa10.07□□□□□ -0.8
PKP4-203ENST00000411900 A0A087WV48 116 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 PMS2P1A4D2B8 440 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 CFAP69A5D8W1 941 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 SOCS5O75159 536 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 HEXIM1O94992 359 aaKnown RBP10.06□□□□□ -0.8
PKP4-203ENST00000411900 PGLSO95336 258 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 PDHA1P08559 390 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 CYP2A6P11509 494 aaPredicted RBP10.06□□□□□ -0.8
PKP4-203ENST00000411900 TNNT1P13805 278 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 ABCG1P45844 678 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 KIAA1024LP59773 190 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 GBE1Q04446 702 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 GALNT2Q10471 571 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 IHHQ14623 411 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 PAFAH1B3Q15102 231 aaKnown RBP10.06□□□□□ -0.8
PKP4-203ENST00000411900 ISXQ2M1V0 245 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 ASTE1Q2TB18 679 aaPredicted RBP10.06□□□□□ -0.8
PKP4-203ENST00000411900 ARMC12Q5T9G4 340 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 PNCKQ6P2M8 343 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 LRRC69Q6ZNQ3 347 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 RBM44Q6ZP01 1051 aaKnown RBP10.06□□□□□ -0.8
PKP4-203ENST00000411900 TAF8Q7Z7C8 310 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 HEATR4Q86WZ0 1026 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 GKN2Q86XP6 184 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 CACTIN-AS1Q8N1I8 211 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 PQLC3Q8N755 202 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 ARL10Q8N8L6 244 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 ATL2Q8NHH9 583 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 FAM71BQ8TC56 605 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 PTCD2Q8WV60 388 aaKnown RBP10.06□□□□□ -0.8
PKP4-203ENST00000411900 SCG3Q8WXD2 468 aaKnown RBP10.06□□□□□ -0.8
PKP4-203ENST00000411900 RAPGEF5Q92565 580 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 CCDC74AQ96AQ1 378 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 TBATAQ96M53 351 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 COQ10AQ96MF6 247 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 TMEM168Q9H0V1 697 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 WDR26Q9H7D7 661 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 RRAGDQ9NQL2 400 aaPredicted RBP10.06□□□□□ -0.8
PKP4-203ENST00000411900 RBM22Q9NW64 420 aaKnown RBP eCLIP10.06□□□□□ -0.81e-7■■■□□ 14.7
PKP4-203ENST00000411900 ZNHIT6Q9NWK9 470 aaKnown RBP10.06□□□□□ -0.8
PKP4-203ENST00000411900 NCKIPSDQ9NZQ3 722 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 SATB2Q9UPW6 733 aa10.06□□□□□ -0.8
PKP4-203ENST00000411900 ARHGEF17Q96PE2 2063 aaPredicted RBP10.06□□□□□ -0.8
PKP4-203ENST00000411900 A0A1W2PNU3 283 aaPredicted RBP10.05□□□□□ -0.8
PKP4-203ENST00000411900 A0A1W2PQ67 120 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 LRRD1A4D1F6 860 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 SOWAHDA6NJG2 315 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 B4DGG1 531 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 MATN3O15232 486 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 RRP8O43159 456 aaKnown RBP10.05□□□□□ -0.8
PKP4-203ENST00000411900 NRDCO43847 1150 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 LCA5LO95447 670 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 HLA-DQB2P05538 268 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 KRT7P08729 469 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 TMEM253P0C7T8 217 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 MSNP26038 577 aaKnown RBP10.05□□□□□ -0.8
PKP4-203ENST00000411900 ACTN2P35609 894 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 EPHB1P54762 984 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 SLC10A2Q12908 348 aaPredicted RBP10.05□□□□□ -0.8
PKP4-203ENST00000411900 ARHGEF7Q14155 803 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 SPIDRQ14159 915 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 PDK2Q15119 407 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 IFI16Q16666 785 aaKnown RBP10.05□□□□□ -0.8
PKP4-203ENST00000411900 TSR1Q2NL82 804 aaKnown RBP10.05□□□□□ -0.8
PKP4-203ENST00000411900 TBC1D25Q3MII6 688 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 RAET1GQ6H3X3 334 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 TIGD7Q6NT04 549 aaPredicted RBP10.05□□□□□ -0.8
PKP4-203ENST00000411900 DOK6Q6PKX4 331 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 Q6ZVL8 140 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 USP45Q70EL2 814 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 B4GALNT4Q76KP1 1039 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 REXO1L1PQ8IX06 675 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 SDR16C5Q8N3Y7 309 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 TEX26Q8N6G2 289 aa10.05□□□□□ -0.8
PKP4-203ENST00000411900 Q8N9G6 341 aaPredicted RBP10.05□□□□□ -0.8
PKP4-203ENST00000411900 CCNYQ8ND76 341 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms