RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 SCAF4O95104 1147 aaKnown RBP5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CELF2O95319 508 aaKnown RBP5.03□□□□□ -1.6
GABPB1-204ENST00000396464 AK1P00568 194 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 GALTP07902 379 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CTPS1P17812 591 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 ADRA2CP18825 462 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 HK1P19367 917 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CHRM3P20309 590 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 MYF6P23409 242 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 GLRA2P23416 452 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 PAX7P23759 505 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CD27P26842 260 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 SFNP31947 248 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CTNNB1P35222 781 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 RFC4P35249 363 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 PBX1P40424 430 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CASRP41180 1078 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 ETV4P43268 484 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CRKLP46109 303 aaKnown RBP5.03□□□□□ -1.6
GABPB1-204ENST00000396464 MEOX1P50221 254 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 TOB1P50616 345 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-204ENST00000396464 KCNQ1P51787 676 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 DUSP2Q05923 314 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 RAPSNQ13702 412 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 SGCBQ16585 318 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 SMN1Q16637 294 aaKnown RBP5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CCDC142Q17RM4 750 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 ZSCAN23Q3MJ62 389 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 KCNT1Q5JUK3 1230 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 TEX35Q5T0J7 233 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 RBM20Q5T481 1227 aaKnown RBP5.03□□□□□ -1.6
GABPB1-204ENST00000396464 C6orf163Q5TEZ5 329 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 TMEM200BQ69YZ2 307 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 AFTPHQ6ULP2 937 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 NHLRC1Q6VVB1 395 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 TRIM72Q6ZMU5 477 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 OTOP2Q7RTS6 562 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CLYBLQ8N0X4 340 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 SPARTQ8N0X7 666 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 RASGEF1CQ8N431 466 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 DCLK2Q8N568 766 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 PDPRQ8NCN5 879 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 MCUQ8NE86 351 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 OR52K1Q8NGK4 314 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 GANCQ8TET4 914 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CHURC1Q8WUH1 139 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 NPIPB3Q92617 1050 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 RABGGTAQ92696 567 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 C5orf30Q96GV9 206 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 ZBTB45Q96K62 511 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CEP295NLQ96MC4 621 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 ZNF558Q96NG5 402 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 KLHL32Q96NJ5 620 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 EIF3CQ99613 913 aaKnown RBP5.03□□□□□ -1.6
GABPB1-204ENST00000396464 HNRNPABQ99729 332 aaKnown RBP5.03□□□□□ -1.6
GABPB1-204ENST00000396464 PKP2Q99959 881 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 SEMA3CQ99985 751 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 EDEM2Q9BV94 578 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CARD6Q9BX69 1037 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 PLA2G12BQ9BX93 195 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 OSBPL8Q9BZF1 889 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 WNT5BQ9H1J7 359 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 GOLPH3LQ9H4A5 285 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 WDR26Q9H7D7 661 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 CXorf36Q9H7Y0 433 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 KCNK9Q9NPC2 374 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 OLAHQ9NV23 265 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 FBXO28Q9NVF7 368 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 RBM28Q9NW13 759 aaKnown RBP5.03□□□□□ -1.6
GABPB1-204ENST00000396464 PSD3Q9NYI0 1048 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.03□□□□□ -1.6
GABPB1-204ENST00000396464 ANKMY1Q9P2S6 941 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 HDAC6Q9UBN7 1215 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 GRID1Q9ULK0 1009 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 PLAGL1Q9UM63 463 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 SLC12A4Q9UP95 1085 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 MRPS17Q9Y2R5 130 aaKnown RBP5.03□□□□□ -1.6
GABPB1-204ENST00000396464 UBE2J1Q9Y385 318 aaPredicted RBP5.03□□□□□ -1.6
GABPB1-204ENST00000396464 SLC30A1Q9Y6M5 507 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 ACEP12821 1306 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 SALL3Q9BXA9 1300 aa5.03□□□□□ -1.6
GABPB1-204ENST00000396464 A0A087WV48 116 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 A0A1W2PRG0 241 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 XKRY2A2RUG3 117 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 NRP1O14786 923 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 SLC30A4O14863 429 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 EIF3DO15371 548 aaKnown RBP eCLIP5.02□□□□□ -1.61
GABPB1-204ENST00000396464 PLRG1O43660 514 aaKnown RBP5.02□□□□□ -1.61
GABPB1-204ENST00000396464 USP12O75317 370 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 KAT7O95251 611 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 MT-ATP6P00846 226 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 ATXN1LP0C7T5 689 aaKnown RBP5.02□□□□□ -1.61
GABPB1-204ENST00000396464 ARSAP15289 507 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 CD72P21854 359 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 ACHEP22303 614 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 SOAT1P35610 550 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 MTNR1AP48039 350 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 CENPAP49450 140 aa5.02□□□□□ -1.61
GABPB1-204ENST00000396464 YWHAZP63104 245 aaKnown RBP5.02□□□□□ -1.61
GABPB1-204ENST00000396464 GCNT1Q02742 428 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms