RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 FAM167BQ9BTA0 163 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 MCMBPQ9BTE3 642 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 IQCGQ9H095 443 aaKnown RBP12.1□□□□□ -0.47
USF1-203ENST00000368021 EBF2Q9HAK2 575 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 SLC40A1Q9NP59 571 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 HPS4Q9NQG7 708 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 HACD3Q9P035 362 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 SLC2A6Q9UGQ3 507 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 EVLQ9UI08 416 aaPredicted RBP12.1□□□□□ -0.47
USF1-203ENST00000368021 ERVW-1Q9UQF0 538 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 PSAT1Q9Y617 370 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 MYO15AQ9UKN7 3530 aa12.1□□□□□ -0.47
USF1-203ENST00000368021 HMX2A2RU54 273 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 OTOL1A6NHN0 477 aaPredicted RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 FAM47DPA6NHR8 397 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 TRIM24O15164 1050 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 TYROBPO43914 113 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 DNAJC8O75937 253 aaPredicted RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 POP4O95707 220 aaKnown RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 DLDP09622 509 aaKnown RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 SERPINA4P29622 427 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 SPRP35270 261 aaPredicted RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 NNMTP40261 264 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 PDE1BQ01064 536 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 SLC18A2Q05940 514 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 RAD51Q06609 339 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 SIGLEC14Q08ET2 396 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 EIF4HQ15056 248 aaKnown RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 TAF1AQ15573 450 aaPredicted RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 QPCTQ16769 361 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 MYLK3Q32MK0 819 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 LACTB2Q53H82 288 aaPredicted RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 KIAA0408Q6ZU52 694 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 SPATA21Q7Z572 469 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 C12orf40Q86WS4 652 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 SIX5Q8N196 739 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 LPCAT1Q8NF37 534 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 MYO19Q96H55 970 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 MRGPRX3Q96LB0 322 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 SRPK1Q96SB4 655 aaKnown RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 AGAP2Q99490 1192 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 RBBP8Q99708 897 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 C19orf43Q9BQ61 176 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 TNKS2Q9H2K2 1166 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 CD248Q9HCU0 757 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 C11orf16Q9NQ32 467 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 IARS2Q9NSE4 1012 aaKnown RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 SLC17A6Q9P2U8 582 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 DEC1Q9P2X7 70 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 SLCO3A1Q9UIG8 710 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 SLC8A2Q9UPR5 921 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 PCDHB9Q9Y5E1 797 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 ARL5AQ9Y689 179 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 ZDBF2Q9HCK1 2354 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 DMDP11532 3685 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 CCDC78A2IDD5 438 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 CFAP73A6NFT4 308 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 C2orf81A6NN90 581 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 WASH3PC4AMC7 463 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 STK25O00506 426 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 TIMM44O43615 452 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 GSTA1P08263 222 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 ITGA2BP08514 1039 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 CHN1P15882 459 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 EIF2DP41214 584 aaKnown RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 ZNF140P52738 457 aaPredicted RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 LIMK2P53671 638 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 GUCY1A3Q02108 690 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 RUNX3Q13761 415 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 THOC5Q13769 683 aaKnown RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 ACCSLQ4AC99 568 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 LRRC23Q53EV4 343 aaPredicted RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 CARD16Q5EG05 197 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 GLT6D1Q7Z4J2 308 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 STRA8Q7Z7C7 330 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 GALNT7Q86SF2 657 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 CAMK1DQ8IU85 385 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 C4orf33Q8N1A6 199 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 KDM1BQ8NB78 822 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 FAM81AQ8TBF8 368 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 ACMSDQ8TDX5 336 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 FRS2Q8WU20 508 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 PDCD6IPQ8WUM4 868 aaKnown RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 PIH1D2Q8WWB5 315 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 ISL2Q96A47 359 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 VOPP1Q96AW1 172 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 PPP1R14BQ96C90 147 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 RMDN2Q96LZ7 410 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 ZNF641Q96N77 438 aaPredicted RBP12.09□□□□□ -0.47
USF1-203ENST00000368021 MFSD1Q9H3U5 465 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 MAGEE1Q9HCI5 957 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 KCNK9Q9NPC2 374 aa12.09□□□□□ -0.47
USF1-203ENST00000368021 KIAA1549LQ6ZVL6 1849 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 A0A1W2PQ67 120 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 TMEM221A6NGB7 291 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 M0R296 226 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 RFPL1O75677 317 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 PRKCGP05129 697 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 CD72P21854 359 aa12.08□□□□□ -0.48
USF1-203ENST00000368021 HADHAP40939 763 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms