RNA–Protein interactions for RNA: ENST00000360467.5

COL4A2-201, Transcript of collagen type IV alpha 2 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A2, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-201ENST00000360467 LEMD2Q8NC56 503 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 XPR1Q9UBH6 696 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 CNOT6Q9ULM6 557 aaKnown RBP17.12■□□□□ 0.33
COL4A2-201ENST00000360467 CARNS1A5YM72 827 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 RHPN2P1A8MT19 583 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 ZNF135P52742 658 aaPredicted RBP17.12■□□□□ 0.33
COL4A2-201ENST00000360467 SQLEQ14534 574 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 NDUFAF6Q330K2 333 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 FUT10Q6P4F1 479 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 ABHD15Q6UXT9 468 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 ALYREFQ86V81 257 aaKnown RBP17.12■□□□□ 0.33
COL4A2-201ENST00000360467 SLAIN1Q8ND83 568 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 PMM1Q92871 262 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 SLC9A7Q96T83 725 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 PTCH2Q9Y6C5 1203 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 AGLP35573 1532 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 EPHA3P29320 983 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 AMZ1Q400G9 498 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 OR52E6Q96RD3 313 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 SLC39A8Q9C0K1 460 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 IL6P05231 212 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 SNRPB2P08579 225 aaKnown RBP17.12■□□□□ 0.33
COL4A2-201ENST00000360467 ZNF155Q12901 538 aaPredicted RBP17.12■□□□□ 0.33
COL4A2-201ENST00000360467 DHRSXQ8N5I4 330 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 PHF10Q8WUB8 498 aaKnown RBP17.12■□□□□ 0.33
COL4A2-201ENST00000360467 BATF3Q9NR55 127 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 OTCP00480 354 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 ITGA2BP08514 1039 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 IGFALSP35858 605 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 ZNF248Q8NDW4 579 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 P2RY11Q96G91 374 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 ZNF670Q9BS34 389 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 FGFBP2Q9BYJ0 223 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 PDZD7Q9H5P4 517 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 EGFL7Q9UHF1 273 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 ZNF490Q9ULM2 529 aaPredicted RBP17.12■□□□□ 0.33
COL4A2-201ENST00000360467 MTF2Q9Y483 593 aaPredicted RBP17.12■□□□□ 0.33
COL4A2-201ENST00000360467 STON1Q9Y6Q2 735 aa17.12■□□□□ 0.33
COL4A2-201ENST00000360467 TSPAN1O60635 241 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 FGF19O95750 216 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 ATP5F1P24539 256 aaPredicted RBP17.11■□□□□ 0.33
COL4A2-201ENST00000360467 DSC2Q02487 901 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 SLC25A52Q3SY17 297 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 ARHGAP36Q6ZRI8 547 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 CYP2S1Q96SQ9 504 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 C9orf16Q9BUW7 83 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 PPP1R11O60927 126 aaPredicted RBP17.11■□□□□ 0.33
COL4A2-201ENST00000360467 ZNF132P52740 706 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 FKBP1BP68106 108 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 SULT2A1Q06520 285 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 C9orf64Q5T6V5 341 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 CHST15Q7LFX5 561 aaPredicted RBP17.11■□□□□ 0.33
COL4A2-201ENST00000360467 GALNT13Q8IUC8 556 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 CREG2Q8IUH2 290 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 ADHFE1Q8IWW8 467 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 SETD9Q8NE22 299 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 ENKURQ8TC29 256 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
COL4A2-201ENST00000360467 MAML3Q96JK9 1138 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 PTGFRNQ9P2B2 879 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 L1RE1Q9UN81 338 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 PNMA8CA0A1B0GUJ8 204 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 CACNA2D1P54289 1103 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 DLG2Q15700 870 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 INO80DQ53TQ3 878 aaPredicted RBP17.11■□□□□ 0.33
COL4A2-201ENST00000360467 EXOC3L1Q86VI1 746 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 FBXO15Q8NCQ5 510 aaPredicted RBP17.11■□□□□ 0.33
COL4A2-201ENST00000360467 ZNF398Q8TD17 642 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 PIGKQ92643 395 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 WNT7AO00755 349 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 RFXANKO14593 260 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 MFSD11O43934 449 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 KHDRBS3O75525 346 aaKnown RBP17.11■□□□□ 0.33
COL4A2-201ENST00000360467 NFATC1O95644 943 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 TACR2P21452 398 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 CTSOP43234 321 aaPredicted RBP17.11■□□□□ 0.33
COL4A2-201ENST00000360467 CDC42P60953 191 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 INTS11Q5TA45 600 aaKnown RBP17.11■□□□□ 0.33
COL4A2-201ENST00000360467 SPRYD7Q5W111 196 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 TMC5Q6UXY8 1006 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.11■□□□□ 0.33
COL4A2-201ENST00000360467 DCBLD1Q8N8Z6 715 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 AGXT2Q9BYV1 514 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 LMAN2LQ9H0V9 348 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 CCNE2O96020 404 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 CST3P01034 146 aaPredicted RBP17.11■□□□□ 0.33
COL4A2-201ENST00000360467 GDF6Q6KF10 455 aaPredicted RBP17.11■□□□□ 0.33
COL4A2-201ENST00000360467 HIPK1Q86Z02 1210 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 SLC9A6Q92581 669 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 SLC47A1Q96FL8 570 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 SLC35C2Q9NQQ7 365 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 CLN6Q9NWW5 311 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 CLEC4AQ9UMR7 237 aa17.11■□□□□ 0.33
COL4A2-201ENST00000360467 CDH3P22223 829 aa17.1■□□□□ 0.33
COL4A2-201ENST00000360467 TIE1P35590 1138 aa17.1■□□□□ 0.33
COL4A2-201ENST00000360467 SPESP1Q6UW49 350 aa17.1■□□□□ 0.33
COL4A2-201ENST00000360467 PYROXD2Q8N2H3 581 aa17.1■□□□□ 0.33
COL4A2-201ENST00000360467 SHC3Q92529 594 aa17.1■□□□□ 0.33
COL4A2-201ENST00000360467 HMCESQ96FZ2 354 aa17.1■□□□□ 0.33
COL4A2-201ENST00000360467 PPP3R2Q96LZ3 170 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms