RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 PCDH9Q9HC56 1237 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 UPB1Q9UBR1 384 aa16.42■□□□□ 0.22
PTCH1-201ENST00000331920 POLR3HQ9Y535 204 aaPredicted RBP16.42■□□□□ 0.22
PTCH1-201ENST00000331920 LDOC1O95751 146 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 PIRTP0C851 137 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 CSH1P0DML2 217 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 CSH2P0DML3 217 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 GHRP10912 638 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 AHCYP23526 432 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 PPP3CAQ08209 521 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 MAPK14Q16539 360 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 ALG10Q5BKT4 473 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 AAGABQ6PD74 315 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 CD101Q93033 1021 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 KIAA1683Q9H0B3 1180 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 ADGRE2Q9UHX3 823 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 CPA4Q9UI42 421 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 PRKCDQ05655 676 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 TMPRSS4Q9NRS4 437 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 MALT1Q9UDY8 824 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 ASF1AQ9Y294 204 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 FKBP7Q9Y680 259 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 AZGP1P25311 298 aaKnown RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 CDH8P55286 799 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 S100A12P80511 92 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 LSM12Q3MHD2 195 aaKnown RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 PLCZ1Q86YW0 608 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 SEC14L3Q9UDX4 400 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 TRBV23OR9-2A0A075B6M9 112 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 C9IYK1 514 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 UBE2Q2LH0YL09 131 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 NPTX2P47972 431 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 GJA9P57773 515 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 RPP38P78345 283 aaKnown RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 NFE2Q16621 373 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 FSTL5Q8N475 847 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 C7orf57Q8NEG2 295 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 DLG3Q92796 817 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 SERPINB11Q96P15 392 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 COMMD4Q9H0A8 199 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 BARX2Q9UMQ3 279 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 EME2A4GXA9 379 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 H3BSH0 61 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 CAMTA2O94983 1202 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 SEMA5AQ13591 1074 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 PAPD7Q5XG87 772 aaKnown RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 CD302Q8IX05 232 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 CMTR2Q8IYT2 770 aaKnown RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 ALLCQ8N6M5 410 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 C1orf216Q8TAB5 229 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 METTL21AQ8WXB1 218 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 PPCDCQ96CD2 204 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 ERMAPQ96PL5 475 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 TREM1Q9NP99 234 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 STOX2Q9P2F5 926 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 PLGP00747 810 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 ACVR2BQ13705 512 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 RAB43Q86YS6 212 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 OR52J3Q8NH60 311 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 PTCD3Q96EY7 689 aaKnown RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 C11orf16Q9NQ32 467 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 MYH11P35749 1972 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 FAM237BA0A1B0GVD1 139 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 ANXA2P2A6NMY6 339 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 GPR89AB7ZAQ6 455 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 ANXA2P07355 339 aaKnown RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 GPR89BP0CG08 455 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 IL12BP29460 328 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 AXLP30530 894 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 IFI35P80217 286 aaPredicted RBP16.41■□□□□ 0.22
PTCH1-201ENST00000331920 FOLH1Q04609 750 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 COQ8AQ8NI60 647 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 CLPTM1LQ96KA5 538 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 FAM105AQ9NUU6 356 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 ITGA11Q9UKX5 1188 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 CAPN6Q9Y6Q1 641 aa16.41■□□□□ 0.22
PTCH1-201ENST00000331920 MLYCDO95822 493 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 PSKH1P11801 424 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 USP49Q70CQ1 688 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 FAM83AQ86UY5 434 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 APBB2Q92870 758 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 TEFMQ96QE5 360 aaKnown RBP16.4■□□□□ 0.22
PTCH1-201ENST00000331920 KANSL3Q9P2N6 904 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 ITGB1BP2Q9UKP3 347 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 CDH7Q9ULB5 785 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 AP3M1Q9Y2T2 418 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 NUAK1O60285 661 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 VNN2O95498 520 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 SLC35G4P0C7Q5 338 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 PTPN9P43378 593 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 LCN1P1Q5VSP4 162 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 TMPRSS9Q7Z410 1059 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 PTGR2Q8N8N7 351 aaPredicted RBP16.4■□□□□ 0.22
PTCH1-201ENST00000331920 PCSK9Q8NBP7 692 aaKnown RBP16.4■□□□□ 0.22
PTCH1-201ENST00000331920 OR52K1Q8NGK4 314 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 NSUN4Q96CB9 384 aaKnown RBP16.4■□□□□ 0.22
PTCH1-201ENST00000331920 LMLNQ96KR4 655 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 DEFB129Q9H1M3 183 aa16.4■□□□□ 0.22
PTCH1-201ENST00000331920 TBC1D17Q9HA65 648 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms