RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 A6NCN8 305 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 FAM90A10PA6NDY2 464 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 OR6C75A6NL08 312 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 CDRT15L2A8MXV6 281 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 H3BNX3 289 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 K7ENM7 598 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 ASAP2O43150 1006 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 HSPA12AO43301 675 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 TIMM44O43615 452 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 ITM2AO43736 263 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 GFPT2O94808 682 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 OAZ2O95190 189 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 DDX5P17844 614 aaKnown RBP4.53□□□□□ -1.68
CCDC54-201ENST00000261058 HOXD3P31249 432 aaPredicted RBP4.53□□□□□ -1.68
CCDC54-201ENST00000261058 HNRNPH1P31943 449 aaKnown RBP4.53□□□□□ -1.68
CCDC54-201ENST00000261058 AMTP48728 403 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 MXI1P50539 228 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 PRAMEP78395 509 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 AIMP2Q13155 320 aaKnown RBP4.53□□□□□ -1.68
CCDC54-201ENST00000261058 ACVR2BQ13705 512 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 EFNB3Q15768 340 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 ADIPOQQ15848 244 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 CDONQ4KMG0 1287 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 FSCBQ5H9T9 825 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 KLHL35Q6PF15 583 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 PQLC2Q6ZP29 291 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 PDILTQ8N807 584 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 POMGNT1Q8WZA1 660 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 LRFN5Q96NI6 719 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 SEPT5Q99719 369 aaPredicted RBP4.53□□□□□ -1.68
CCDC54-201ENST00000261058 HAUS8Q9BT25 410 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 DCLK3Q9C098 648 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 TMX4Q9H1E5 349 aaPredicted RBP4.53□□□□□ -1.68
CCDC54-201ENST00000261058 EBF3Q9H4W6 596 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 SYNCQ9H7C4 482 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 TBC1D29Q9UFV1 150 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 AGO1Q9UL18 857 aaKnown RBP4.53□□□□□ -1.68
CCDC54-201ENST00000261058 PTGDR2Q9Y5Y4 395 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 SQORQ9Y6N5 450 aa4.53□□□□□ -1.68
CCDC54-201ENST00000261058 RSF1Q96T23 1441 aaPredicted RBP4.52□□□□□ -1.69
CCDC54-201ENST00000261058 MYO1GB0I1T2 1018 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 VILLO15195 856 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 NKX2-2O95096 273 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 CRYABP02511 175 aaKnown RBP4.52□□□□□ -1.69
CCDC54-201ENST00000261058 LDHCP07864 332 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 ALOX12P18054 663 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 PIGAP37287 484 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 METAP2P50579 478 aaKnown RBP eCLIP4.52□□□□□ -1.69
CCDC54-201ENST00000261058 NAE1Q13564 534 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 ASTE1Q2TB18 679 aaPredicted RBP4.52□□□□□ -1.69
CCDC54-201ENST00000261058 MMEL1Q495T6 779 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 DUSP28Q4G0W2 176 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 FAM69BQ5VUD6 431 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 PMS2CLQ68D20 193 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 AWAT2Q6E213 333 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 C9orf47Q6ZRZ4 202 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 SEPT14Q6ZU15 432 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 SHFQ7M4L6 423 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 TSPAN33Q86UF1 283 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 HAPLN4Q86UW8 402 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 RNF168Q8IYW5 571 aaPredicted RBP4.52□□□□□ -1.69
CCDC54-201ENST00000261058 ADGRF2Q8IZF7 708 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 MIGA1Q8NAN2 632 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 ADAMTS14Q8WXS8 1223 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 IGSF8Q969P0 613 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 PGAM5Q96HS1 289 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 CMTM3Q96MX0 182 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 ZNF570Q96NI8 536 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 IFIH1Q9BYX4 1025 aaKnown RBP4.52□□□□□ -1.69
CCDC54-201ENST00000261058 RANGRFQ9HD47 186 aaPredicted RBP4.52□□□□□ -1.69
CCDC54-201ENST00000261058 MMP25Q9NPA2 562 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 VPS28Q9UK41 221 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 ERVK-11Q9UQG0 969 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 INSL5Q9Y5Q6 135 aa4.52□□□□□ -1.69
CCDC54-201ENST00000261058 DYTNA2CJ06 578 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 CD8B2A6NJW9 211 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 NDUFS3O75489 264 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 SLC25A12O75746 678 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 CYC1P08574 325 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 KRT10P13645 584 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 GABRB1P18505 474 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 HOXA13P31271 388 aaPredicted RBP4.51□□□□□ -1.69
CCDC54-201ENST00000261058 NLRP5P59047 1200 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 LINC00205P59089 165 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 CREB5Q02930 508 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 NEDD9Q14511 834 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 CRYMQ14894 314 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 PCGF3Q3KNV8 242 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 GKAP1Q5VSY0 366 aaPredicted RBP4.51□□□□□ -1.69
CCDC54-201ENST00000261058 DAB2IPQ5VWQ8 1189 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 METTL2BQ6P1Q9 378 aaKnown RBP4.51□□□□□ -1.69
CCDC54-201ENST00000261058 TMEM154Q6P9G4 183 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 DPPA4Q7L190 304 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 FOXRED2Q8IWF2 684 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 FAM120BQ96EK7 910 aaKnown RBP4.51□□□□□ -1.69
CCDC54-201ENST00000261058 METTL2AQ96IZ6 378 aaKnown RBP4.51□□□□□ -1.69
CCDC54-201ENST00000261058 SH3GL2Q99962 352 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 SDF4Q9BRK5 362 aa4.51□□□□□ -1.69
CCDC54-201ENST00000261058 MMTAG2Q9BU76 263 aaKnown RBP4.51□□□□□ -1.69
CCDC54-201ENST00000261058 KAT14Q9H8E8 782 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms