RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 FASTKD1Q53R41 847 aaKnown RBP18.16■□□□□ 0.5
VIM-201ENST00000224237 MFSD6LQ8IWD5 586 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 ANKS4BQ8N8V4 417 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 CCDC197Q8NCU1 140 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 RAB3IL1Q8TBN0 382 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 E2F7Q96AV8 911 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 TSNARE1Q96NA8 513 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 C19orf43Q9BQ61 176 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 FAM83CQ9BQN1 747 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 GPR63Q9BZJ6 419 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 ZFP14Q9HCL3 533 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 TMEM216Q9P0N5 145 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 SIRPGQ9P1W8 387 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 SLC8A2Q9UPR5 921 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 PKP3Q9Y446 797 aa18.16■□□□□ 0.5
VIM-201ENST00000224237 KIF26AQ9ULI4 1882 aaPredicted RBP18.15■□□□□ 0.5
VIM-201ENST00000224237 SPTBN5Q9NRC6 3674 aaKnown RBP18.15■□□□□ 0.5
VIM-201ENST00000224237 PHGDHO43175 533 aaKnown RBP18.15■□□□□ 0.5
VIM-201ENST00000224237 EDF1O60869 148 aaKnown RBP18.15■□□□□ 0.5
VIM-201ENST00000224237 PROCP04070 461 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 ATP5BP06576 529 aaKnown RBP18.15■□□□□ 0.5
VIM-201ENST00000224237 BPGMP07738 259 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 ALPIP09923 528 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 SLC35E2BP0CK96 405 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 COL6A2P12110 1019 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 CTPS1P17812 591 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 RECQLP46063 649 aaPredicted RBP18.15■□□□□ 0.5
VIM-201ENST00000224237 STC1P52823 247 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 IRF9Q00978 393 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 ZNF789Q5FWF6 425 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 ATAT1Q5SQI0 421 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 C16orf46Q6P387 395 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 DPY19L3Q6ZPD9 716 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 EP400NLQ6ZTU2 488 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 Q6ZVU0 165 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 LDB1Q86U70 411 aaPredicted RBP18.15■□□□□ 0.5
VIM-201ENST00000224237 NUDCD3Q8IVD9 361 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 ETFBKMTQ8IXQ9 262 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 PLD6Q8N2A8 252 aaKnown RBP18.15■□□□□ 0.5
VIM-201ENST00000224237 VOPP1Q96AW1 172 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 ECHDC3Q96DC8 303 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 ZNF641Q96N77 438 aaPredicted RBP18.15■□□□□ 0.5
VIM-201ENST00000224237 OMDQ99983 421 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 MECRQ9BV79 373 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 CIPCQ9C0C6 399 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 SUV39H2Q9H5I1 410 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 SLCO1B3Q9NPD5 702 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 INTS10Q9NVR2 710 aaKnown RBP18.15■□□□□ 0.5
VIM-201ENST00000224237 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.15■□□□□ 0.5
VIM-201ENST00000224237 STARD13Q9Y3M8 1113 aa18.15■□□□□ 0.5
VIM-201ENST00000224237 A0A1W2PQ67 120 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 WASH3PC4AMC7 463 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 TULP3O75386 442 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 SRPRAP08240 638 aaKnown RBP18.14■□□□□ 0.49
VIM-201ENST00000224237 BGNP21810 368 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 PMLP29590 882 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 TAS2R39P59534 338 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 ADAM15Q13444 863 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 RBM20Q5T481 1227 aaKnown RBP18.14■□□□□ 0.49
VIM-201ENST00000224237 TANGO2Q6ICL3 276 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 CES5AQ6NT32 575 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 LYSMD3Q7Z3D4 306 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 C12orf40Q86WS4 652 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 CEP97Q8IW35 865 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 CYB5D2Q8WUJ1 264 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 TSPAN17Q96FV3 270 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 MRGPRX3Q96LB0 322 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 ZDHHC6Q9H6R6 413 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 ECT2Q9H8V3 914 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 IL17CQ9P0M4 197 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 ACOT9Q9Y305 439 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 TRIOBPQ9H2D6 2365 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 A0A087X1B8 175 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 CAPN8A6NHC0 703 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 OTOL1A6NHN0 477 aaPredicted RBP18.14■□□□□ 0.49
VIM-201ENST00000224237 DLDP09622 509 aaKnown RBP18.14■□□□□ 0.49
VIM-201ENST00000224237 SP100P23497 879 aaPredicted RBP18.14■□□□□ 0.49
VIM-201ENST00000224237 IRX4P78413 519 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 SEMA3AQ14563 771 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 ITIH4Q14624 930 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 PTPRRQ15256 657 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 HECTD2Q5U5R9 776 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 ATG16L1Q676U5 607 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 FAM45BPQ6NSW5 357 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 SPATA21Q7Z572 469 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 OR2A12Q8NGT7 310 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 FAM45AQ8TCE6 357 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 LYSMD1Q96S90 227 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 MYADMQ96S97 322 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 TCF12Q99081 682 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 NDNQ99608 321 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 ZFYVE1Q9HBF4 777 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 ZNF358Q9NW07 568 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 FKBPLQ9UIM3 349 aa18.14■□□□□ 0.49
VIM-201ENST00000224237 RRP15Q9Y3B9 282 aaKnown RBP18.14■□□□□ 0.49
VIM-201ENST00000224237 BRWD1Q9NSI6 2320 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 PFDN6O15212 129 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 APOA4P06727 396 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 MC4RP32245 332 aa18.13■□□□□ 0.49
VIM-201ENST00000224237 GMPRP36959 345 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms