RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 CFAP47Q6ZTR5 3102 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 ACACAQ13085 2346 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 EME2A4GXA9 379 aaPredicted RBP18.26■□□□□ 0.51
VCX3A-203ENST00000612369 PSMD11O00231 422 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 CACNB4O00305 520 aaPredicted RBP18.26■□□□□ 0.51
VCX3A-203ENST00000612369 PDE2AO00408 941 aaPredicted RBP18.26■□□□□ 0.51
VCX3A-203ENST00000612369 OPA1O60313 960 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 GCATO75600 419 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 PGLSO95336 258 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 MT-CO3P00414 261 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 CTSEP14091 401 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 TSHRP16473 764 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 CLDN6P56747 220 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 SRP54P61011 504 aaKnown RBP18.26■□□□□ 0.51
VCX3A-203ENST00000612369 TRAF2Q12933 501 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 C1orf61Q13536 156 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 RTP5Q14D33 572 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 ACOX1Q15067 660 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 TCEAL1Q15170 157 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 ALG11Q2TAA5 492 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 ALG1LQ6GMV1 187 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 ESRP1Q6NXG1 681 aaKnown RBP18.26■□□□□ 0.51
VCX3A-203ENST00000612369 HID1Q8IV36 788 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 CBARPQ8N350 705 aaPredicted RBP18.26■□□□□ 0.51
VCX3A-203ENST00000612369 TPCN2Q8NHX9 752 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 COQ10AQ96MF6 247 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 RNF157Q96PX1 679 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 ABCG4Q9H172 646 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 SPTLC3Q9NUV7 552 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 KLQ9UEF7 1012 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 OR1A2Q9Y585 309 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 DGKBQ9Y6T7 804 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 CHD6Q8TD26 2715 aa18.26■□□□□ 0.51
VCX3A-203ENST00000612369 TNFRSF10CO14798 259 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 YY2O15391 372 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 HEXIM1O94992 359 aaKnown RBP18.25■□□□□ 0.51
VCX3A-203ENST00000612369 TNFP01375 233 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 GM2AP17900 193 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 SLC1A1P43005 524 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 ITKQ08881 620 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 NR0B2Q15466 257 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 CNGA3Q16281 694 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 LRRC38Q5VT99 294 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 CDCP2Q5VXM1 449 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 USP45Q70EL2 814 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 PQLC3Q8N755 202 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 PLA2G15Q8NCC3 412 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 IFI44Q8TCB0 444 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 NAT6Q93015 286 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 TSACCQ96A04 125 aaPredicted RBP18.25■□□□□ 0.51
VCX3A-203ENST00000612369 FUBP1Q96AE4 644 aaKnown RBP18.25■□□□□ 0.51
VCX3A-203ENST00000612369 HDAC11Q96DB2 347 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 ZNF830Q96NB3 372 aaPredicted RBP18.25■□□□□ 0.51
VCX3A-203ENST00000612369 MCCC1Q96RQ3 725 aaPredicted RBP18.25■□□□□ 0.51
VCX3A-203ENST00000612369 SEMA3CQ99985 751 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 TRIM5Q9C035 493 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 CLPBQ9H078 707 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 RBM22Q9NW64 420 aaKnown RBP eCLIP18.25■□□□□ 0.51
VCX3A-203ENST00000612369 DOLKQ9UPQ8 538 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 RAI2Q9Y5P3 530 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 MYLKQ15746 1914 aa18.25■□□□□ 0.51
VCX3A-203ENST00000612369 APC2O95996 2303 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 A8MX80 341 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 FZD6O60353 706 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 CCNB1P14635 433 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 ARHGEF7Q14155 803 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 PNCKQ6P2M8 343 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 GKN2Q86XP6 184 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 OR56A4Q8NGH8 313 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 MAPK15Q8TD08 544 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 RAPGEF5Q92565 580 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 NUS1Q96E22 293 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 DEPDC7Q96QD5 511 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 WDR26Q9H7D7 661 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 ZFHX4Q86UP3 3567 aa18.24■□□□□ 0.51
VCX3A-203ENST00000612369 CPED1A4D0V7 1026 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 LRRD1A4D1F6 860 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 MYF5P13349 255 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 CA4P22748 312 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 GBE1Q04446 702 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 CDKN3Q16667 212 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 GUSBP11Q6P575 273 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 EFL1Q7Z2Z2 1120 aaKnown RBP18.23■□□□□ 0.51
VCX3A-203ENST00000612369 RD3Q7Z3Z2 195 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 SLC35F3Q8IY50 421 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 CCDC13Q8IYE1 715 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 WDR48Q8TAF3 677 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.23■□□□□ 0.51
VCX3A-203ENST00000612369 PIH1D2Q8WWB5 315 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 GRAMD1AQ96CP6 724 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 DTD2Q96FN9 168 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 RBM15Q96T37 977 aaKnown RBP eCLIP18.23■□□□□ 0.51
VCX3A-203ENST00000612369 MAK16Q9BXY0 300 aaKnown RBP18.23■□□□□ 0.51
VCX3A-203ENST00000612369 DDX56Q9NY93 547 aaKnown RBP18.23■□□□□ 0.51
VCX3A-203ENST00000612369 DTLQ9NZJ0 730 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 DNPEPQ9ULA0 475 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 RAXQ9Y2V3 346 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 AK5Q9Y6K8 562 aa18.23■□□□□ 0.51
VCX3A-203ENST00000612369 DSPP15924 2871 aaKnown RBP18.22■□□□□ 0.51
VCX3A-203ENST00000612369 TMEM202A6NGA9 273 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms