RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 MLPHQ9BV36 600 aaPredicted RBP25.84■■□□□ 1.73
TRIM28-204ENST00000594806 GBA3Q9H227 469 aa25.84■■□□□ 1.73
TRIM28-204ENST00000594806 FZD3Q9NPG1 666 aa25.84■■□□□ 1.73
TRIM28-204ENST00000594806 FSCN3Q9NQT6 498 aa25.84■■□□□ 1.73
TRIM28-204ENST00000594806 R3HDM2Q9Y2K5 976 aaKnown RBP25.84■■□□□ 1.73
TRIM28-204ENST00000594806 SNX11Q9Y5W9 270 aa25.84■■□□□ 1.73
TRIM28-204ENST00000594806 CABIN1Q9Y6J0 2220 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 CEP250Q9BV73 2442 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 CAPN8A6NHC0 703 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 C4orf47A7E2U8 309 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 RAD51BO15315 384 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 CEP104O60308 925 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 THEGLP0DJG4 465 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 HNF1BP35680 557 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 ZNF423Q2M1K9 1284 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 CBARPQ8N350 705 aaPredicted RBP25.83■■□□□ 1.73
TRIM28-204ENST00000594806 SLC35F6Q8N357 371 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 TP53I13Q8NBR0 393 aaPredicted RBP25.83■■□□□ 1.73
TRIM28-204ENST00000594806 LPCAT1Q8NF37 534 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 SPATA22Q8NHS9 363 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 RMDN1Q96DB5 314 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 TRIB3Q96RU7 358 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 MYOCQ99972 504 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 RTKNQ9BST9 563 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 GAREM1Q9H706 876 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 C10orf88Q9H8K7 445 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 HOMER3Q9NSC5 361 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 PYCARDQ9ULZ3 195 aa25.83■■□□□ 1.73
TRIM28-204ENST00000594806 AAR2Q9Y312 384 aaKnown RBP25.83■■□□□ 1.73
TRIM28-204ENST00000594806 NPIPB15A6NHN6 443 aaPredicted RBP25.82■■□□□ 1.72
TRIM28-204ENST00000594806 ENC1O14682 589 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 YKT6O15498 198 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 LIASO43766 372 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 NDST3O95803 873 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 MT-CYBP00156 380 aaPredicted RBP25.82■■□□□ 1.72
TRIM28-204ENST00000594806 FGGP02679 453 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 CTPS1P17812 591 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 GEMP55040 296 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 YPEL5P62699 121 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 PRPSAP1Q14558 356 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 CNGA3Q16281 694 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 CCNG2Q16589 344 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 QPCTQ16769 361 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 RSPO4Q2I0M5 234 aaPredicted RBP25.82■■□□□ 1.72
TRIM28-204ENST00000594806 DRICH1Q6PGQ1 229 aaPredicted RBP25.82■■□□□ 1.72
TRIM28-204ENST00000594806 LAYNQ6UX15 382 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 KCND1Q9NSA2 647 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 CA5BQ9Y2D0 317 aa25.82■■□□□ 1.72
TRIM28-204ENST00000594806 ASCC3Q8N3C0 2202 aaKnown RBP25.82■■□□□ 1.72
TRIM28-204ENST00000594806 TMEM131Q92545 1883 aa25.81■■□□□ 1.72
TRIM28-204ENST00000594806 PMPCBO75439 489 aa25.81■■□□□ 1.72
TRIM28-204ENST00000594806 GCATO75600 419 aa25.81■■□□□ 1.72
TRIM28-204ENST00000594806 RECQL5O94762 991 aaPredicted RBP25.81■■□□□ 1.72
TRIM28-204ENST00000594806 CLDN2P57739 230 aa25.81■■□□□ 1.72
TRIM28-204ENST00000594806 SEMG2Q02383 582 aa25.81■■□□□ 1.72
TRIM28-204ENST00000594806 ACOX1Q15067 660 aa25.81■■□□□ 1.72
TRIM28-204ENST00000594806 KDELC1Q6UW63 502 aa25.81■■□□□ 1.72
TRIM28-204ENST00000594806 Q6ZSR6 202 aa25.81■■□□□ 1.72
TRIM28-204ENST00000594806 RTP4Q96DX8 246 aa25.81■■□□□ 1.72
TRIM28-204ENST00000594806 COQ10AQ96MF6 247 aa25.81■■□□□ 1.72
TRIM28-204ENST00000594806 GPR27Q9NS67 375 aa25.81■■□□□ 1.72
TRIM28-204ENST00000594806 TTC7AQ9ULT0 858 aaPredicted RBP25.81■■□□□ 1.72
TRIM28-204ENST00000594806 COQ6Q9Y2Z9 468 aa25.81■■□□□ 1.72
TRIM28-204ENST00000594806 PCDHGB2Q9Y5G2 931 aa25.81■■□□□ 1.72
TRIM28-204ENST00000594806 LOC285095A0A1B0GVY8 99 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 POM121BA6NF01 834 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 A8MX80 341 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 ALPIP09923 528 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 LHCGRP22888 699 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 CXCR5P32302 372 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 WNT3AP56704 352 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 PFN3P60673 137 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 OASLQ15646 514 aaKnown RBP25.8■■□□□ 1.72
TRIM28-204ENST00000594806 PCSK7Q16549 785 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 WSCD2Q2TBF2 565 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 CRTC1Q6UUV9 634 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 PTAR1Q7Z6K3 402 aaPredicted RBP25.8■■□□□ 1.72
TRIM28-204ENST00000594806 RASGEF1CQ8N431 466 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 FAM71DQ8N9W8 422 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 LRRC45Q96CN5 670 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 NAP1L3Q99457 506 aaPredicted RBP25.8■■□□□ 1.72
TRIM28-204ENST00000594806 ELF4Q99607 663 aaPredicted RBP25.8■■□□□ 1.72
TRIM28-204ENST00000594806 TMEM121Q9BTD3 319 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 MAGEE1Q9HCI5 957 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 DLL3Q9NYJ7 618 aa25.8■■□□□ 1.72
TRIM28-204ENST00000594806 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP25.8■■□□□ 1.72
TRIM28-204ENST00000594806 GOLGA6CA6NDK9 693 aa25.79■■□□□ 1.72
TRIM28-204ENST00000594806 GOLGA6BA6NDN3 693 aa25.79■■□□□ 1.72
TRIM28-204ENST00000594806 USP27XA6NNY8 438 aa25.79■■□□□ 1.72
TRIM28-204ENST00000594806 H0Y8X5 98 aa25.79■■□□□ 1.72
TRIM28-204ENST00000594806 CES2O00748 559 aa25.79■■□□□ 1.72
TRIM28-204ENST00000594806 ITGAVP06756 1048 aa25.79■■□□□ 1.72
TRIM28-204ENST00000594806 GOLGA6DP0CG33 693 aa25.79■■□□□ 1.72
TRIM28-204ENST00000594806 IGFALSP35858 605 aa25.79■■□□□ 1.72
TRIM28-204ENST00000594806 RXRGP48443 463 aa25.79■■□□□ 1.72
TRIM28-204ENST00000594806 ARRB1P49407 418 aaPredicted RBP25.79■■□□□ 1.72
TRIM28-204ENST00000594806 MTM1Q13496 603 aa25.79■■□□□ 1.72
TRIM28-204ENST00000594806 PTK2BQ14289 1009 aa25.79■■□□□ 1.72
TRIM28-204ENST00000594806 PUM1Q14671 1186 aaKnown RBP eCLIP25.79■■□□□ 1.72
TRIM28-204ENST00000594806 SUZ12Q15022 739 aaKnown RBP25.79■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms