RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 PMS2P1A4D2B8 440 aa17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 RASA4BC9J798 803 aa17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 CASC3O15234 703 aaKnown RBP17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 INSIG1O15503 277 aa17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 RASA4O43374 803 aa17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 TNFSF15O95150 251 aa17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 CELA2BP08218 269 aaPredicted RBP17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 HTR1BP28222 390 aa17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 NDST2P52849 883 aa17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 CYTH1Q15438 398 aa17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 DPYSL2Q16555 572 aa17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 UGP2Q16851 508 aa17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 ALG11Q2TAA5 492 aa17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 HSPH1Q92598 858 aa17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 DOLKQ9UPQ8 538 aa17.66■□□□□ 0.42
SHKBP1-203ENST00000594298 RASGRP1O95267 797 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 LCA5LO95447 670 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 KRT7P08729 469 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 RARAP10276 462 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 C6P13671 934 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 XPAP23025 273 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 IL1R2P27930 398 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 MAN1A1P33908 653 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 CLN3Q13286 438 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 EIF3IQ13347 325 aaKnown RBP17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 KRT81Q14533 505 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 NFATC4Q14934 902 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 TCEAL1Q15170 157 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 CYP4V2Q6ZWL3 525 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 LZTR1Q8N653 840 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 KYQ8NBH2 561 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 NETO2Q8NC67 525 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 OR6C4Q8NGE1 309 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 PCDH19Q8TAB3 1148 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 ZNF641Q96N77 438 aaPredicted RBP17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 SUV39H2Q9H5I1 410 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 PDFQ9HBH1 243 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 PCDHGA7Q9Y5G6 932 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 MGAQ8IWI9 3026 aa17.65■□□□□ 0.42
SHKBP1-203ENST00000594298 ARHGAP42A6NI28 874 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 TMX2-CTNND1H3BSU7 103 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 J3QKU1 62 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 MTA2O94776 668 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 PIGNO95427 931 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 CTSEP14091 401 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 ERCC2P18074 760 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 INPP5AQ14642 412 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 MESDQ14696 234 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 SMTNL2Q2TAL5 461 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 ERAP2Q6P179 960 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 FOXR1Q6PIV2 292 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 BRAT1Q6PJG6 821 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 ENPP7Q6UWV6 458 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 GKN2Q86XP6 184 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 HID1Q8IV36 788 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 MAP7D3Q8IWC1 876 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 ATL2Q8NHH9 583 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 TSACCQ96A04 125 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 CCDC74AQ96AQ1 378 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 EXOC2Q96KP1 924 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 TUBGCP5Q96RT8 1024 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 APOOQ9BUR5 198 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 SEMA4CQ9C0C4 833 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 LRRC19Q9H756 370 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 PCDH12Q9NPG4 1184 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 CWC15Q9P013 229 aaKnown RBP17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 RCOR3Q9P2K3 495 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 GULP1Q9UBP9 304 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 UBA2Q9UBT2 640 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 RABGEF1Q9UJ41 708 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 COQ6Q9Y2Z9 468 aa17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 EPN1Q9Y6I3 576 aaPredicted RBP17.64■□□□□ 0.41
SHKBP1-203ENST00000594298 CFAP69A5D8W1 941 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 D6RAR5 112 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 PLD2O14939 933 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 FECHP22830 423 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 MMP12P39900 470 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 SLC1A1P43005 524 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 SRP54P61011 504 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 SLC25A11Q02978 314 aaKnown RBP17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 MTM1Q13496 603 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 CCDC81Q6ZN84 652 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 POLNQ7Z5Q5 900 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 KCTD6Q8NC69 237 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 RBM15Q96T37 977 aaKnown RBP eCLIP17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 SYNDIG1Q9H7V2 258 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 SIRPGQ9P1W8 387 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 KLQ9UEF7 1012 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 ACSL6Q9UKU0 697 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 GPR34Q9UPC5 381 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 PCDHA13Q9Y5I0 950 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 DGKBQ9Y6T7 804 aa17.63■□□□□ 0.41
SHKBP1-203ENST00000594298 A0A1W2PQM1 296 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 B8ZZF3 427 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 PRAMEF11O60813 436 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 NDUFA10O95299 355 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 TCF4P15884 667 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 CCKBRP32239 447 aa17.62■□□□□ 0.41
SHKBP1-203ENST00000594298 NOP2P46087 812 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms