RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 MYLK3Q32MK0 819 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 RALGPS1Q5JS13 557 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 NYAP1Q6ZVC0 841 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 CCDC13Q8IYE1 715 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 PDCD7Q8N8D1 485 aaKnown RBP15.78■□□□□ 0.12
USB1-208ENST00000563207 MAIP1Q8WWC4 291 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 MAML1Q92585 1016 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 PPP1R16AQ96I34 528 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 PBKQ96KB5 322 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 EXOC2Q96KP1 924 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 CINPQ9BW66 212 aaPredicted RBP15.78■□□□□ 0.12
USB1-208ENST00000563207 FRMD8P1Q9BZ68 369 aaPredicted RBP15.78■□□□□ 0.12
USB1-208ENST00000563207 GPR27Q9NS67 375 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 DNAJC28Q9NX36 388 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 DKK4Q9UBT3 224 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 U3KQA8 63 aa15.78■□□□□ 0.12
USB1-208ENST00000563207 TLX3O43711 291 aaPredicted RBP15.77■□□□□ 0.12
USB1-208ENST00000563207 CCNB1P14635 433 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 CES1P23141 567 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 MMP13P45452 471 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 RPS21P63220 83 aaKnown RBP15.77■□□□□ 0.12
USB1-208ENST00000563207 SEMG2Q02383 582 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 CCDC15Q0P6D6 951 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 KLF1Q13351 362 aaPredicted RBP15.77■□□□□ 0.12
USB1-208ENST00000563207 ZNF211Q13398 564 aaPredicted RBP15.77■□□□□ 0.12
USB1-208ENST00000563207 ZNF235Q14590 738 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 NOMO1Q15155 1222 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 LLGL1Q15334 1064 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 ZNF805Q5CZA5 627 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 NPNTQ6UXI9 565 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 PDZD3Q86UT5 571 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 SLC35F6Q8N357 371 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 TFB1MQ8WVM0 346 aaKnown RBP15.77■□□□□ 0.12
USB1-208ENST00000563207 HAUS1Q96CS2 278 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 FEM1CQ96JP0 617 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 DCBLD2Q96PD2 775 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 FERMT1Q9BQL6 677 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 C1QTNF2Q9BXJ5 285 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 OSBPL1AQ9BXW6 950 aa15.77■□□□□ 0.12
USB1-208ENST00000563207 CPEB1Q9BZB8 566 aaKnown RBP15.77■□□□□ 0.12
USB1-208ENST00000563207 TCEAL2Q9H3H9 227 aaPredicted RBP15.77■□□□□ 0.12
USB1-208ENST00000563207 A6NNZ2 444 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 CES2O00748 559 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 AP1G1O43747 822 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 MAP3K6O95382 1288 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 C1SP09871 688 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 PECAM1P16284 738 aaPredicted RBP15.76■□□□□ 0.11
USB1-208ENST00000563207 ACP1P24666 158 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 ITPKBP27987 946 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 GNG11P61952 73 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 IFI35P80217 286 aaPredicted RBP15.76■□□□□ 0.11
USB1-208ENST00000563207 SLC10A7Q0GE19 358 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 AP1B1Q10567 949 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 KIAA1161Q6NSJ0 714 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 AADACL2Q6P093 401 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 SLC13A5Q86YT5 568 aaPredicted RBP15.76■□□□□ 0.11
USB1-208ENST00000563207 TSEN2Q8NCE0 465 aaKnown RBP15.76■□□□□ 0.11
USB1-208ENST00000563207 OR4C6Q8NH72 309 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 ACTL9Q8TC94 416 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 HCAR2Q8TDS4 363 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 APOLD1Q96LR9 279 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 TUBGCP5Q96RT8 1024 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 LGMNQ99538 433 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 MGME1Q9BQP7 344 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 SAE1Q9UBE0 346 aaPredicted RBP15.76■□□□□ 0.11
USB1-208ENST00000563207 LHX3Q9UBR4 397 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 ZKSCAN5Q9Y2L8 839 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 HS3ST3A1Q9Y663 406 aa15.76■□□□□ 0.11
USB1-208ENST00000563207 COL27A1Q8IZC6 1860 aaPredicted RBP15.76■□□□□ 0.11
USB1-208ENST00000563207 URB1O60287 2271 aaKnown RBP15.75■□□□□ 0.11
USB1-208ENST00000563207 CACNA1GO43497 2377 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 ANKRD36A6QL64 1941 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 AREL1O15033 823 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 MMP20O60882 483 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 PIGNO95427 931 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 TIMP2P16035 220 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 AP1S1P61966 158 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 OTUD4Q01804 1114 aaKnown RBP15.75■□□□□ 0.11
USB1-208ENST00000563207 EIF2B5Q13144 721 aaKnown RBP15.75■□□□□ 0.11
USB1-208ENST00000563207 COL9A2Q14055 689 aaPredicted RBP15.75■□□□□ 0.11
USB1-208ENST00000563207 PRKD1Q15139 912 aaPredicted RBP15.75■□□□□ 0.11
USB1-208ENST00000563207 GDPD4Q6W3E5 623 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 TTC7BQ86TV6 843 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 RBFAQ8N0V3 343 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 CENPTQ96BT3 561 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 BBC3Q96PG8 261 aaPredicted RBP15.75■□□□□ 0.11
USB1-208ENST00000563207 NAP1L3Q99457 506 aaPredicted RBP15.75■□□□□ 0.11
USB1-208ENST00000563207 VAT1Q99536 393 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 IL12RB2Q99665 862 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 HERPUD2Q9BSE4 406 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 WRAP53Q9BUR4 548 aaKnown RBP15.75■□□□□ 0.11
USB1-208ENST00000563207 POLR1EQ9GZS1 481 aaKnown RBP15.75■□□□□ 0.11
USB1-208ENST00000563207 MBNL1Q9NR56 388 aaKnown RBP15.75■□□□□ 0.11
USB1-208ENST00000563207 TTC7AQ9ULT0 858 aaPredicted RBP15.75■□□□□ 0.11
USB1-208ENST00000563207 COQ6Q9Y2Z9 468 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 PCDHB1Q9Y5F3 818 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 ACACAQ13085 2346 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 IGSF10Q6WRI0 2623 aa15.75■□□□□ 0.11
USB1-208ENST00000563207 SPTY2D1-AS1A0A0U1RR47 76 aa15.74■□□□□ 0.11
USB1-208ENST00000563207 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms