RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TNNT1P13805 278 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CCNB1P14635 433 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 NME1P15531 152 aaKnown RBP9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 JUNDP17535 347 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 GBE1Q04446 702 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 RALGDSQ12967 914 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ILKQ13418 452 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 INPP5AQ14642 412 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 IRF4Q15306 451 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TPRG1LQ5T0D9 272 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ARMC12Q5T9G4 340 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 FAXCQ5TGI0 409 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 UNQ6494/PRO21346Q6UXR6 183 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CCDC13Q8IYE1 715 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 NDUFAF2Q8N183 169 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CBARPQ8N350 705 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PLD5Q8N7P1 536 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TPCN2Q8NHX9 752 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 GATA6Q92908 595 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SCRN2Q96FV2 425 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ZNF830Q96NB3 372 aaPredicted RBP9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SEMA3CQ99985 751 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 APOOQ9BUR5 198 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 DUSP23Q9BVJ7 150 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SLC13A1Q9BZW2 595 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 POLR1EQ9GZS1 481 aaKnown RBP9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 KCTD5Q9NXV2 234 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 NLGN3Q9NZ94 848 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 DTLQ9NZJ0 730 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SPASTQ9UBP0 616 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 B4GALT6Q9UBX8 382 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 KLF15Q9UIH9 416 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PPIL1Q9Y3C6 166 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 RAI2Q9Y5P3 530 aa9.77□□□□□ -0.85
TNFRSF1A-214ENST00000543048 KMT2BQ9UMN6 2715 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ACACAQ13085 2346 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 A0A0A6YYK5 440 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TMEM8BA6NDV4 472 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 GOLGA6L6A8MZA4 724 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 APOL1O14791 398 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 FFAR2O15552 330 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 AQP9O43315 295 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SPOPO43791 374 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 RFPL3O75679 317 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 NEBLO76041 1014 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 RECQL5O94762 991 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PGLSO95336 258 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 JCHAINP01591 159 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 KRT1P04264 644 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 HOXC4P09017 264 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 GIMD1P0DJR0 217 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ACP1P24666 158 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 HTR1BP28222 390 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 VIPR1P32241 457 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ACADVLP49748 655 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 BLKP51451 505 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 DUSP3P51452 185 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 DAB2P98082 770 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 E2F1Q01094 437 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PPARDQ03181 441 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TRAF2Q12933 501 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 MTM1Q13496 603 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ACOX1Q15067 660 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SMAD1Q15797 465 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ST3GAL2Q16842 350 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 SLC9A4Q6AI14 798 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ENPP7Q6UWV6 458 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 DHRS13Q6UX07 377 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 KDM7AQ6ZMT4 941 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 MACC1Q6ZN28 852 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 BZW1Q7L1Q6 419 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TMPRSS12Q86WS5 348 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 RFX6Q8HWS3 928 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 FAM181AQ8N9Y4 354 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 KDF1Q8NAX2 398 aaPredicted RBP9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ATL2Q8NHH9 583 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 LMX1AQ8TE12 382 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 LRRN4Q8WUT4 740 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PIH1D2Q8WWB5 315 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 HDAC11Q96DB2 347 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CALR3Q96L12 384 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TBATAQ96M53 351 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 LGMNQ99538 433 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 BRD8Q9H0E9 1235 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 CAAP1Q9H8G2 361 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 EVA1BQ9NVM1 165 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 HYOU1Q9Y4L1 999 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 HEY1Q9Y5J3 304 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 URB1O60287 2271 aaKnown RBP9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 IGF2RP11717 2491 aa9.76□□□□□ -0.85
TNFRSF1A-214ENST00000543048 DMXL2Q8TDJ6 3036 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 USP24Q9UPU5 2620 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 K7ESM1 405 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 TPP1O14773 563 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 PSTPIP1O43586 416 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 FZD6O60353 706 aa9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 HEXIM1O94992 359 aaKnown RBP9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 ZRANB2O95218 330 aaKnown RBP eCLIP9.75□□□□□ -0.85
TNFRSF1A-214ENST00000543048 NDUFA10O95299 355 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms