RNA–Protein interactions for RNA: ENST00000533801.6

ATP2C1-224, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,690 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-224ENST00000533801 PEX11BO96011 259 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 C1RP00736 705 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 SMAD3P84022 425 aaKnown RBP15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 POU4F1Q01851 419 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 RPS6KA2Q15349 733 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 LRRC73Q5JTD7 316 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 TXNDC8Q6A555 127 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 MSANTD2Q6P1R3 559 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 ANKS3Q6ZW76 656 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 LSMEM2Q8N112 164 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 GALNT4Q8N4A0 578 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 ARRDC2Q8TBH0 407 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 ZNF296Q8WUU4 475 aaPredicted RBP15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 TMEM169Q96HH4 297 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 CATSPERZQ9NTU4 200 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 TIMM22Q9Y584 194 aa15.97■□□□□ 0.15
ATP2C1-224ENST00000533801 IGHA2P01877 340 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 TLDC1Q6P9B6 456 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 POMPQ9Y244 141 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 TMEM114B3SHH9 223 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 TBL1XO60907 577 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 KLKB1P03952 638 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 CPOXP36551 454 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 KPNA2P52292 529 aaKnown RBP15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 FLOT2Q14254 428 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 PTPRNQ16849 979 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 STXBP5Q5T5C0 1151 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 MRNIPQ6NTE8 343 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 TMEM207Q6UWW9 146 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 IFNEQ86WN2 208 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 ARL14EPQ8N8R7 260 aaPredicted RBP15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 SLC22A12Q96S37 553 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 SMG9Q9H0W8 520 aaKnown RBP15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 PIF1Q9H611 641 aa15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 OLA1Q9NTK5 396 aaKnown RBP15.96■□□□□ 0.15
ATP2C1-224ENST00000533801 K7ERQ8 282 aa15.96■□□□□ 0.14
ATP2C1-224ENST00000533801 IPO13O94829 963 aaKnown RBP15.96■□□□□ 0.14
ATP2C1-224ENST00000533801 VNN2O95498 520 aa15.96■□□□□ 0.14
ATP2C1-224ENST00000533801 CKMP06732 381 aa15.96■□□□□ 0.14
ATP2C1-224ENST00000533801 NET1Q7Z628 596 aaPredicted RBP15.96■□□□□ 0.14
ATP2C1-224ENST00000533801 DSELQ8IZU8 1212 aa15.96■□□□□ 0.14
ATP2C1-224ENST00000533801 KYQ8NBH2 561 aa15.96■□□□□ 0.14
ATP2C1-224ENST00000533801 OR4L1Q8NH43 312 aa15.96■□□□□ 0.14
ATP2C1-224ENST00000533801 FKBPLQ9UIM3 349 aa15.96■□□□□ 0.14
ATP2C1-224ENST00000533801 COPG1Q9Y678 874 aaKnown RBP15.96■□□□□ 0.14
ATP2C1-224ENST00000533801 E5RI56 91 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 IL1BP01584 269 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 CST5P28325 142 aaPredicted RBP15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 C1QTNF8P60827 252 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 ACTR3P61158 418 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 CDH18Q13634 790 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 TBCCQ15814 346 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 DPF3Q92784 378 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 RPL10LQ96L21 214 aaKnown RBP15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 C1orf74Q96LT6 269 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 ZBED2Q9BTP6 218 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 TLR9Q9NR96 1032 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 IGSF5Q9NSI5 407 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 DONSONQ9NYP3 566 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 STX18Q9P2W9 335 aaKnown RBP15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 MAGEC1O60732 1142 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 ALPIP09923 528 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 PEX2P28328 305 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 MZF1P28698 734 aaPredicted RBP15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 PSEN1P49768 467 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 THOP1P52888 689 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 IL10RBQ08334 325 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 DDI1Q8WTU0 396 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 PTERQ96BW5 349 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 TSPAN17Q96FV3 270 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 AGO1Q9UL18 857 aaKnown RBP15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 RNF112Q9ULX5 631 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 MYO16Q9Y6X6 1858 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 H7C4K7 107 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 BTN3A1O00481 513 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 STX7O15400 261 aaKnown RBP15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 LDB2O43679 373 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 SMIM24O75264 130 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 S1PR4O95977 384 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 THRAP10827 490 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 PPARGP37231 505 aaPredicted RBP15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 MAGEA12P43365 314 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 USP41Q3LFD5 358 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 PAQR3Q6TCH7 311 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 SKA2Q8WVK7 121 aaPredicted RBP15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 VPS45Q9NRW7 570 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 V9GYQ6 96 aa15.95■□□□□ 0.14
ATP2C1-224ENST00000533801 ZBBXA8MT70 800 aa15.94■□□□□ 0.14
ATP2C1-224ENST00000533801 NIPSNAP2O75323 286 aa15.94■□□□□ 0.14
ATP2C1-224ENST00000533801 LINC00032P0C843 101 aa15.94■□□□□ 0.14
ATP2C1-224ENST00000533801 XRCC1P18887 633 aaPredicted RBP15.94■□□□□ 0.14
ATP2C1-224ENST00000533801 FGFR3P22607 806 aa15.94■□□□□ 0.14
ATP2C1-224ENST00000533801 HOXC13P31276 330 aa15.94■□□□□ 0.14
ATP2C1-224ENST00000533801 CLCN5P51795 746 aa15.94■□□□□ 0.14
ATP2C1-224ENST00000533801 RHOAP61586 193 aa15.94■□□□□ 0.14
ATP2C1-224ENST00000533801 FAM26DQ5JW98 314 aa15.94■□□□□ 0.14
ATP2C1-224ENST00000533801 TMEM151AQ8N4L1 468 aa15.94■□□□□ 0.14
ATP2C1-224ENST00000533801 GPR78Q96P69 363 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms