RNA–Protein interactions for RNA: ENST00000520880.1

CTHRC1-204, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 4 BASIC

Gene CTHRC1, Length 560 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-204ENST00000520880 C1orf167Q5SNV9 1468 aa4.3□□□□□ -1.72
CTHRC1-204ENST00000520880 COL18A1P39060 1754 aa4.3□□□□□ -1.72
CTHRC1-204ENST00000520880 KDM3BQ7LBC6 1761 aa4.3□□□□□ -1.72
CTHRC1-204ENST00000520880 DCCP43146 1447 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 KDRP35968 1356 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 IGSF1Q8N6C5 1336 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 MED1Q15648 1581 aaPredicted RBP4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 HMX3A6NHT5 357 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 CLGNO14967 610 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 KRT38O76015 456 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 CGAP01215 116 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 IL1AP01583 271 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 IFIT2P09913 472 aaKnown RBP4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 ZNF853P0CG23 659 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 SETSIPP0DME0 302 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 SSTR2P30874 369 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 PEX5P50542 639 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 PRKAA2P54646 552 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 ICA1Q05084 483 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 SLC18A2Q05940 514 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 ST3GAL1Q11201 340 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 HDAC1Q13547 482 aaPredicted RBP4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 CAPSQ13938 189 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 CCSAPQ6IQ19 270 aaPredicted RBP4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 ZNF449Q6P9G9 518 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 C9orf139Q6ZV77 190 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 AADATQ8N5Z0 425 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 MCPH1Q8NEM0 835 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 SVIPQ8NHG7 77 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 CSGALNACT1Q8TDX6 532 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 SORCS1Q8WY21 1168 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 THUMPD2Q9BTF0 503 aaKnown RBP4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 TAF1DQ9H5J8 278 aaPredicted RBP4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 G6PC2Q9NQR9 355 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 TNNQ9UQP3 1299 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 SIPA1L3O60292 1781 aaPredicted RBP4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 NCOA3Q9Y6Q9 1424 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 ADAMTS7Q9UKP4 1686 aa4.29□□□□□ -1.72
CTHRC1-204ENST00000520880 SEPT4O43236 478 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 LMX1BO60663 402 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 VNN2O95498 520 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 AMD1P17707 334 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 CTPS1P17812 591 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 CD72P21854 359 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 HOXC9P31274 260 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 RBM5P52756 815 aaKnown RBP eCLIP4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 LMOD3Q0VAK6 560 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 RBM39Q14498 530 aaKnown RBP4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 MAP9Q49MG5 647 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 FBXO43Q4G163 708 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 ZNF484Q5JVG2 852 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 SH2D4BQ5SQS7 431 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 STPG1Q5TH74 334 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 FAM69BQ5VUD6 431 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 CENPQQ7L2Z9 268 aaPredicted RBP4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 EXOC3L1Q86VI1 746 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 MB21D2Q8IYB1 491 aaPredicted RBP4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 ANKRD44Q8N8A2 993 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 LINS1Q8NG48 757 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 NEK9Q8TD19 979 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 TRIB2Q92519 343 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 NCSTNQ92542 709 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 FRAT1Q92837 279 aaPredicted RBP4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 WBP1Q96G27 269 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 CTDSP1Q9GZU7 261 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 CLDN16Q9Y5I7 305 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 CRB1P82279 1406 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 NCAPD2Q15021 1401 aa4.28□□□□□ -1.72
CTHRC1-204ENST00000520880 MSH6P52701 1360 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 SCN11AQ9UI33 1791 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 ABCC6O95255 1503 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 PXDNQ92626 1479 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 ABHD14A-ACY1A0A1B0GW23 586 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 TCERG1O14776 1098 aaKnown RBP4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 XPNPEP2O43895 674 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 IGHV4-30-4P0DP06 118 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 MYF6P23409 242 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 AMPHP49418 695 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 CALD1Q05682 793 aaKnown RBP4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 GJB7Q6PEY0 223 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 CCDC129Q6ZRS4 1044 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 TOGARAM2Q6ZUX3 1019 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 MON1AQ86VX9 555 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 DCUN1D3Q8IWE4 304 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 DENND6AQ8IWF6 608 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 CACNA2D3Q8IZS8 1091 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 OR6Y1Q8NGX8 325 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 GOLGA1Q92805 767 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 SMC4Q9NTJ3 1288 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 OR6C3Q9NZP0 311 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 SRP68Q9UHB9 627 aaKnown RBP4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 LAS1LQ9Y4W2 734 aaKnown RBP4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 NHSL1Q5SYE7 1610 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 NOTCH3Q9UM47 2321 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 TMEM94Q12767 1356 aa4.27□□□□□ -1.73
CTHRC1-204ENST00000520880 PKD1L3Q7Z443 1732 aa4.26□□□□□ -1.73
CTHRC1-204ENST00000520880 KIF16BQ96L93 1317 aa4.26□□□□□ -1.73
CTHRC1-204ENST00000520880 SLC25A17O43808 307 aa4.26□□□□□ -1.73
CTHRC1-204ENST00000520880 HBP1O60381 514 aa4.26□□□□□ -1.73
CTHRC1-204ENST00000520880 SERPINC1P01008 464 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms