RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 SNX15Q9NRS6 342 aa18.4■□□□□ 0.54
SDC2-202ENST00000518385 TMEM216Q9P0N5 145 aa18.4■□□□□ 0.54
SDC2-202ENST00000518385 C5orf67F2Z3F1 127 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 F5H423 210 aaPredicted RBP18.39■□□□□ 0.53
SDC2-202ENST00000518385 TEX28O15482 410 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 DCXO43602 365 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 BCAS2O75934 225 aaPredicted RBP18.39■□□□□ 0.53
SDC2-202ENST00000518385 CXCL14O95715 111 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 ATF6P18850 670 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 ME2P23368 584 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 PIK3R1P27986 724 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 PMLP29590 882 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 PPARGP37231 505 aaPredicted RBP18.39■□□□□ 0.53
SDC2-202ENST00000518385 RAB15P59190 212 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 FLOT2Q14254 428 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 MAPRE2Q15555 327 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 PARP15Q460N3 678 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 PIGGQ5H8A4 983 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 TDRD5Q8NAT2 981 aaKnown RBP18.39■□□□□ 0.53
SDC2-202ENST00000518385 SERBP1Q8NC51 408 aaKnown RBP eCLIP18.39■□□□□ 0.53
SDC2-202ENST00000518385 MPP4Q96JB8 637 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 DRC3Q9H069 523 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 RBM38Q9H0Z9 239 aaKnown RBP18.39■□□□□ 0.53
SDC2-202ENST00000518385 EFCAB1Q9HAE3 211 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 CYP4F11Q9HBI6 524 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 RBM22Q9NW64 420 aaKnown RBP eCLIP18.39■□□□□ 0.53
SDC2-202ENST00000518385 MPP6Q9NZW5 540 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 RIMS3Q9UJD0 308 aa18.39■□□□□ 0.53
SDC2-202ENST00000518385 PRSS51A0A1B0GVH4 220 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 GRXCR1A8MXD5 290 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 MATN2O00339 956 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 TFAP2AP05549 437 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 MPP3Q13368 585 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 TLR1Q15399 786 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 ZNF423Q2M1K9 1284 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 SEL1L3Q68CR1 1132 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 FBXL22Q6P050 247 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 POTEHQ6S545 545 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 SATL1Q86VE3 508 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 MIB1Q86YT6 1006 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 CROCCP3Q8IVE0 287 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 SPPL3Q8TCT6 385 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 GIPC2Q8TF65 315 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 DUS3LQ96G46 650 aaKnown RBP18.38■□□□□ 0.53
SDC2-202ENST00000518385 TRMT2BQ96GJ1 504 aaKnown RBP18.38■□□□□ 0.53
SDC2-202ENST00000518385 TBL1YQ9BQ87 522 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 KIFC1Q9BW19 673 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 SLC25A51Q9H1U9 297 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 ZNF385DQ9H6B1 395 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 NOL6Q9H6R4 1146 aaKnown RBP18.38■□□□□ 0.53
SDC2-202ENST00000518385 VPS45Q9NRW7 570 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 IRAK3Q9Y616 596 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 AP4B1Q9Y6B7 739 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 PLXNA4Q9HCM2 1894 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 CRTAMO95727 393 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 TBX18O95935 607 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 RB1P06400 928 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 CNPP09543 421 aaKnown RBP18.38■□□□□ 0.53
SDC2-202ENST00000518385 MYOGP15173 224 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 RPL14P50914 215 aaKnown RBP18.38■□□□□ 0.53
SDC2-202ENST00000518385 UBE3AQ05086 875 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 IL10RBQ08334 325 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 PCID2Q5JVF3 399 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 HECTD3Q5T447 861 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 FAM109BQ6ICB4 259 aaPredicted RBP18.38■□□□□ 0.53
SDC2-202ENST00000518385 FBXL19Q6PCT2 694 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 ZYG11AQ6WRX3 759 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 ARHGAP36Q6ZRI8 547 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 TCEAL8Q8IYN2 117 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 PLD4Q96BZ4 506 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 CCDC124Q96CT7 223 aaKnown RBP18.38■□□□□ 0.53
SDC2-202ENST00000518385 FAR2Q96K12 515 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 C17orf80Q9BSJ5 609 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 NDFIP2Q9NV92 336 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 OXSMQ9NWU1 459 aa18.38■□□□□ 0.53
SDC2-202ENST00000518385 DOCK4Q8N1I0 1966 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 SHROOM3Q8TF72 1996 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 G3V2L1 256 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 VILLO15195 856 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 ARHGEF15O94989 841 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 SLC11A2P49281 568 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 KPNA2P52292 529 aaKnown RBP18.37■□□□□ 0.53
SDC2-202ENST00000518385 ERVFC1P60507 584 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 TUBA4AP68366 448 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 CRADDP78560 199 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 TCHHL1Q5QJ38 904 aaPredicted RBP18.37■□□□□ 0.53
SDC2-202ENST00000518385 LIPMQ5VYY2 423 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 OTOP3Q7RTS5 596 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 DSELQ8IZU8 1212 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 PHTF2Q8N3S3 785 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 TEX26Q8N6G2 289 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 KLHL5Q96PQ7 755 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 LENG8Q96PV6 779 aaPredicted RBP18.37■□□□□ 0.53
SDC2-202ENST00000518385 GCNAQ96QF7 691 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 TRIM56Q9BRZ2 755 aaKnown RBP18.37■□□□□ 0.53
SDC2-202ENST00000518385 SLC2A11Q9BYW1 496 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 NMRAL1Q9HBL8 299 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 TRPM5Q9NZQ8 1165 aa18.37■□□□□ 0.53
SDC2-202ENST00000518385 ZCWPW2A0A1B0GU75 182 aa18.36■□□□□ 0.53
SDC2-202ENST00000518385 ZNF840PA6NDX5 716 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms