RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SLC15A4Q8N697 577 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 SLC2A14Q8TDB8 520 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 PGAP3Q96FM1 320 aaPredicted RBP17.81■□□□□ 0.44
NUP54-205ENST00000507257 ELMO2Q96JJ3 720 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 LPIN3Q9BQK8 851 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 SLC39A3Q9BRY0 314 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 DUSP16Q9BY84 665 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 TRIM54Q9BYV2 358 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 NAA50Q9GZZ1 169 aaKnown RBP17.81■□□□□ 0.44
NUP54-205ENST00000507257 CDHR5Q9HBB8 845 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 WDR6Q9NNW5 1121 aaKnown RBP17.81■□□□□ 0.44
NUP54-205ENST00000507257 ATAD3AQ9NVI7 634 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 GDAP2Q9NXN4 497 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 ERAP1Q9NZ08 941 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 IFT80Q9P2H3 777 aaPredicted RBP17.81■□□□□ 0.44
NUP54-205ENST00000507257 DOLKQ9UPQ8 538 aa17.81■□□□□ 0.44
NUP54-205ENST00000507257 PDCD11Q14690 1871 aaKnown RBP17.81■□□□□ 0.44
NUP54-205ENST00000507257 NEMP2A6NFY4 417 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 ARPC2O15144 300 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 FGF4P08620 206 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 LTA4HP09960 611 aaKnown RBP17.8■□□□□ 0.44
NUP54-205ENST00000507257 ALDOCP09972 364 aaKnown RBP17.8■□□□□ 0.44
NUP54-205ENST00000507257 SLC26A3P40879 764 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 MRPL19P49406 292 aaKnown RBP17.8■□□□□ 0.44
NUP54-205ENST00000507257 IGBP1P78318 339 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 GALNT7Q86SF2 657 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 SFRP1Q8N474 314 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 C19orf60Q96EN9 201 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 TSPAN17Q96FV3 270 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 ZNF347Q96SE7 839 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 TBL1YQ9BQ87 522 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 MROQ9BYG7 248 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 NANOGQ9H9S0 305 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 TREX1Q9NSU2 369 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 KIAA1522Q9P206 1035 aaPredicted RBP17.8■□□□□ 0.44
NUP54-205ENST00000507257 VWA7Q9Y334 891 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 FAM32AQ9Y421 112 aaKnown RBP17.8■□□□□ 0.44
NUP54-205ENST00000507257 SHROOM3Q8TF72 1996 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 DICER1Q9UPY3 1922 aaKnown RBP17.8■□□□□ 0.44
NUP54-205ENST00000507257 TCRBV5S2A0A599 114 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 SOCS7O14512 581 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 ANXA9O76027 345 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 KCNA5P22460 613 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 SLC6A2P23975 617 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 CLCN5P51795 746 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 TRAF2Q12933 501 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 OXA1LQ15070 435 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 BROXQ5VW32 411 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 C9orf57Q5W0N0 161 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 EGFLAMQ63HQ2 1017 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 CLYBLQ8N0X4 340 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 ZNF641Q96N77 438 aaPredicted RBP17.8■□□□□ 0.44
NUP54-205ENST00000507257 ZMAT2Q96NC0 199 aaKnown RBP17.8■□□□□ 0.44
NUP54-205ENST00000507257 FCRL5Q96RD9 977 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 PSD2Q9BQI7 771 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 PRKD2Q9BZL6 878 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 TRNAU1APQ9NX07 287 aaKnown RBP17.8■□□□□ 0.44
NUP54-205ENST00000507257 CMTM6Q9NX76 183 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 FBXW11Q9UKB1 542 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 FBXO5Q9UKT4 447 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 FIS1Q9Y3D6 152 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 PCDHA9Q9Y5H5 950 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 CORINQ9Y5Q5 1042 aa17.8■□□□□ 0.44
NUP54-205ENST00000507257 COL1A2P08123 1366 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 ANGPT2O15123 496 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 XPOTO43592 962 aaKnown RBP17.79■□□□□ 0.44
NUP54-205ENST00000507257 DNAJB5O75953 348 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 ZNF182P17025 639 aaPredicted RBP17.79■□□□□ 0.44
NUP54-205ENST00000507257 MATN1P21941 496 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 RPS12P25398 132 aaKnown RBP17.79■□□□□ 0.44
NUP54-205ENST00000507257 YWHAQP27348 245 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 ILF2Q12905 390 aaKnown RBP17.79■□□□□ 0.44
NUP54-205ENST00000507257 CSHL1Q14406 222 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 FXNQ16595 210 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 UGT3A2Q3SY77 523 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 PITRM1Q5JRX3 1037 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 NOL9Q5SY16 702 aaKnown RBP17.79■□□□□ 0.44
NUP54-205ENST00000507257 GTF2IRD2BQ6EKJ0 949 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 DENND5AQ6IQ26 1287 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 GTF2IRD2Q86UP8 949 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 ZC3H7AQ8IWR0 971 aaKnown RBP17.79■□□□□ 0.44
NUP54-205ENST00000507257 MIER2Q8N344 545 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 TTC30BQ8N4P2 665 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 SCAIQ8N9R8 606 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 GABPB2Q8TAK5 448 aaPredicted RBP17.79■□□□□ 0.44
NUP54-205ENST00000507257 OSCP1Q8WVF1 389 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 TNIP3Q96KP6 325 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 UBXN10Q96LJ8 280 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 CORO1BQ9BR76 489 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 ZFYVE28Q9HCC9 887 aa17.79■□□□□ 0.44
NUP54-205ENST00000507257 GMPR2Q9P2T1 348 aaKnown RBP17.79■□□□□ 0.44
NUP54-205ENST00000507257 TYW5A2RUC4 315 aaKnown RBP17.78■□□□□ 0.44
NUP54-205ENST00000507257 FAM149AA5PLN7 773 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 NRP1O14786 923 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 ABCB7O75027 752 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 JAK1P23458 1154 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 OXTRP30559 389 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 NME3Q13232 169 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 ATP1A4Q13733 1029 aa17.78■□□□□ 0.44
NUP54-205ENST00000507257 ESRP1Q6NXG1 681 aaKnown RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms