RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 FUBP1Q96AE4 644 aaKnown RBP20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 LIN37Q96GY3 246 aaPredicted RBP20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 CSPG4P5Q96PW8 444 aa20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 NUDCD1Q96RS6 583 aa20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 WDR26Q9H7D7 661 aa20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 SIRPGQ9P1W8 387 aa20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 IP6K2Q9UHH9 426 aa20.03■□□□□ 0.8
UBE2D3-220ENST00000505307 BPTFQ12830 3046 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 CR2P20023 1033 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 AMPD1P23109 780 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 CDH6P55285 790 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 CXADRP78310 365 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 ACOX1Q15067 660 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 SMTNL2Q2TAL5 461 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 HGSNATQ68CP4 663 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 PNCKQ6P2M8 343 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 OGFOD3Q6PK18 319 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 GPR156Q8NFN8 814 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 OR1E3Q8WZA6 343 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 SLC39A7Q92504 469 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 HSPH1Q92598 858 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 CCDC74AQ96AQ1 378 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 PDXPQ96GD0 296 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 NAF1Q96HR8 494 aaKnown RBP20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 GFM1Q96RP9 751 aaKnown RBP20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 MGME1Q9BQP7 344 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 RCOR3Q9P2K3 495 aaPredicted RBP20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 B4GALT6Q9UBX8 382 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 PHTF1Q9UMS5 762 aa20.02■□□□□ 0.8
UBE2D3-220ENST00000505307 SHROOM3Q8TF72 1996 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 A0A1W2PNU3 283 aaPredicted RBP20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 TMEM202A6NGA9 273 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 CDRT15L2A8MXV6 281 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 MAFKO60675 156 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 PEX11BO96011 259 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 SERPING1P05155 500 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 RARAP10276 462 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 CYP2A6P11509 494 aaPredicted RBP20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 PNLIPP16233 465 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 SKOR1P84550 965 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 TAF8Q7Z7C8 310 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 CLEC14AQ86T13 490 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 TP53INP2Q8IXH6 220 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 ATPAF2Q8N5M1 289 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 PRR11Q96HE9 360 aaPredicted RBP20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 COQ10AQ96MF6 247 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 TMEM74Q96NL1 305 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 FUCA2Q9BTY2 467 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 STRADBQ9C0K7 418 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 SYNDIG1Q9H7V2 258 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 FGF22Q9HCT0 170 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 APPL1Q9UKG1 709 aa20.01■□□□□ 0.79
UBE2D3-220ENST00000505307 PSMD11O00231 422 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 KLK10O43240 276 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 CPP00450 1065 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 ITGA2BP08514 1039 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 KRT10P13645 584 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 GLB1P16278 677 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 GM2AP17900 193 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 VIPR1P32241 457 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 PDX1P52945 283 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 ZBED6P86452 979 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 RHDQ02161 417 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 C19orf57Q0VDD7 668 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 MARC1Q5VT66 337 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 FAM46DQ8NEK8 389 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 NUS1Q96E22 293 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 NSMCE3Q96MG7 304 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 PCDH18Q9HCL0 1135 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 PHPT1Q9NRX4 125 aaPredicted RBP20■□□□□ 0.79
UBE2D3-220ENST00000505307 ETNK2Q9NVF9 386 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 SSUH2Q9Y2M2 353 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 PCDHGC4Q9Y5F7 938 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 COL27A1Q8IZC6 1860 aaPredicted RBP20■□□□□ 0.79
UBE2D3-220ENST00000505307 ANKRD36A6QL64 1941 aa20■□□□□ 0.79
UBE2D3-220ENST00000505307 D6RAR5 112 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 ERVH48-1M5A8F1 160 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 MYO1FO00160 1098 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 HEXIM1O94992 359 aaKnown RBP19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 TNFSF15O95150 251 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 CYP1A2P05177 515 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 MYCLP1P12525 358 aaPredicted RBP19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 PBX1P40424 430 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 MMP13P45452 471 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 UBASH3AP57075 661 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 FANCCQ00597 558 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 HADHQ16836 314 aaKnown RBP19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 NDUFAF2Q8N183 169 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 CBARPQ8N350 705 aaPredicted RBP19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 KIAA1524Q8TCG1 905 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 PDCD6IPQ8WUM4 868 aaKnown RBP19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 SNRNP27Q8WVK2 155 aaKnown RBP19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 SCRN2Q96FV2 425 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 WBP1Q96G27 269 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 THAP2Q9H0W7 228 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 LRRN3Q9H3W5 708 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 NOD2Q9HC29 1040 aa19.99■□□□□ 0.79
UBE2D3-220ENST00000505307 CYP4F12Q9HCS2 524 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms