RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 EDEM1Q92611 657 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 MR1Q95460 341 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 Q96MF0 132 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 FEM1AQ9BSK4 669 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 APOOQ9BUR5 198 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 BDH2Q9BUT1 245 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 AMBRA1Q9C0C7 1298 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 FGF22Q9HCT0 170 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 OLA1Q9NTK5 396 aaKnown RBP6.59□□□□□ -1.35
HDAC3-206ENST00000471968 IL17CQ9P0M4 197 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 TAAR2Q9P1P5 351 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 MOSPD1Q9UJG1 213 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 LUC7L2Q9Y383 392 aaKnown RBP6.59□□□□□ -1.35
HDAC3-206ENST00000471968 CYP46A1Q9Y6A2 500 aa6.59□□□□□ -1.35
HDAC3-206ENST00000471968 PIKFYVEQ9Y2I7 2098 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 NKX2-6A6NCS4 301 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 TMEM202A6NGA9 273 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 PPP1R3GB7ZBB8 358 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 K7ERQ8 282 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 ARHGEF9O43307 516 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 THAP12O43422 761 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 ENDOD1O94919 500 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 FAM13AO94988 1023 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 MT-CO1P00395 513 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 TPOP07202 933 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 HOXD4P09016 255 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-206ENST00000471968 FGF5P12034 268 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 SRCP12931 536 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 CCNB1P14635 433 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 EGR1P18146 543 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 PDE1BQ01064 536 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 SRSF2Q01130 221 aaKnown RBP6.58□□□□□ -1.36
HDAC3-206ENST00000471968 SLC12A1Q13621 1099 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 RAPGEF1Q13905 1077 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 PCBP2Q15366 365 aaKnown RBP eCLIP6.58□□□□□ -1.36
HDAC3-206ENST00000471968 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.58□□□□□ -1.36
HDAC3-206ENST00000471968 C10orf62Q5T681 223 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-206ENST00000471968 SLC30A9Q6PML9 568 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 UNC45BQ8IWX7 931 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 TAB3Q8N5C8 712 aaPredicted RBP6.58□□□□□ -1.36
HDAC3-206ENST00000471968 OR56A4Q8NGH8 313 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 SH3KBP1Q96B97 665 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 GBP5Q96PP8 586 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 TAAR6Q96RI8 345 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 NDC1Q9BTX1 674 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 TNKS2Q9H2K2 1166 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 BRMS1Q9HCU9 246 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 ANLNQ9NQW6 1124 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 RASSF1Q9NS23 344 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 HMGXB4Q9UGU5 601 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 ADGRE2Q9UHX3 823 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 TCFL5Q9UL49 500 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 TENM1Q9UKZ4 2725 aa6.58□□□□□ -1.36
HDAC3-206ENST00000471968 FAM90A27PA6NNH2 459 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 SOCS6O14544 535 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 DTNBO60941 627 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 ALX3O95076 343 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 LDHAP00338 332 aaKnown RBP6.57□□□□□ -1.36
HDAC3-206ENST00000471968 HMGB1P09429 215 aaKnown RBP6.57□□□□□ -1.36
HDAC3-206ENST00000471968 UGT1A4P22310 534 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 RRM1P23921 792 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 MST1P26927 711 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 AK4P27144 223 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-206ENST00000471968 OTX2P32243 289 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 PLK1P53350 603 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 MYL6P60660 151 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 TFF3Q07654 80 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 GTF3C1Q12789 2109 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 LRRC14Q15048 493 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 ZACNQ401N2 412 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 LRRC73Q5JTD7 316 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 IZUMO3Q5VZ72 239 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 PWWP2BQ6NUJ5 590 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 RPUSD3Q6P087 351 aaKnown RBP6.57□□□□□ -1.36
HDAC3-206ENST00000471968 DPY19L3Q6ZPD9 716 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 CIR1Q86X95 450 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-206ENST00000471968 NRROSQ86YC3 692 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 SLC9A9Q8IVB4 645 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 P3H2Q8IVL5 708 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 ZZZ3Q8IYH5 903 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 RASEFQ8IZ41 740 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 LGI2Q8N0V4 545 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 CBARPQ8N350 705 aaPredicted RBP6.57□□□□□ -1.36
HDAC3-206ENST00000471968 ROBO4Q8WZ75 1007 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 WASF1Q92558 559 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 FER1L6-AS2Q96M78 137 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 FIZ1Q96SL8 496 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 REEP2Q9BRK0 252 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 SDCBP2Q9H190 292 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 PCIF1Q9H4Z3 704 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 PARVGQ9HBI0 331 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 LRTM1Q9HBL6 345 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 SLC24A3Q9HC58 644 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 COQ3Q9NZJ6 369 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 SLC30A1Q9Y6M5 507 aa6.57□□□□□ -1.36
HDAC3-206ENST00000471968 TRBV23OR9-2A0A075B6M9 112 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 SMAD6O43541 496 aaKnown RBP6.56□□□□□ -1.36
HDAC3-206ENST00000471968 ZNF202O95125 648 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 PCCBP05166 539 aa6.56□□□□□ -1.36
HDAC3-206ENST00000471968 ANKRD34CP0C6C1 535 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms