RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, humanhuman

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-210ENST00000457373 KDELC2Q7Z4H8 507 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 ZSCAN30Q86W11 494 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 REXO1L1PQ8IX06 675 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 NDUFAF2Q8N183 169 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 MFSD2AQ8NA29 543 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 LPCAT1Q8NF37 534 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 TRIM58Q8NG06 486 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 PIH1D2Q8WWB5 315 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 BMFQ96LC9 184 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 TEKT5Q96M29 485 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 QKIQ96PU8 341 aaKnown RBP eCLIP10.13□□□□□ -0.791e-6■■■■■ 47.7
RFX3-210ENST00000457373 SMIM14Q96QK8 99 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 TDRD1Q9BXT4 1180 aaKnown RBP10.13□□□□□ -0.79
RFX3-210ENST00000457373 ZDHHC5Q9C0B5 715 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 IL21RQ9HBE5 538 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 GLOD4Q9HC38 313 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 PCDH9Q9HC56 1237 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 UBP1Q9NZI7 540 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 B4GALT6Q9UBX8 382 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 HS3ST3A1Q9Y663 406 aa10.13□□□□□ -0.79
RFX3-210ENST00000457373 FAM186AA6NE01 2351 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 A0A0U1RQS6 177 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 TCRBV7S2A1N4TA0A589 114 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 DCDC2BA2VCK2 349 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 POM121BA6NF01 834 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 TLR4O00206 839 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 KCNN4O15554 427 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 MTSS1O43312 755 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 MAGEC1O60732 1142 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 DXOO77932 396 aaKnown RBP10.12□□□□□ -0.79
RFX3-210ENST00000457373 CER1O95813 267 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 MT-CYBP00156 380 aaPredicted RBP10.12□□□□□ -0.79
RFX3-210ENST00000457373 ELFN1P0C7U0 828 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 NFKB1P19838 968 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 SDHBP21912 280 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 CA4P22748 312 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 NFKBIAP25963 317 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 VIPR1P32241 457 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 CD68P34810 354 aaPredicted RBP10.12□□□□□ -0.79
RFX3-210ENST00000457373 MMP12P39900 470 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 CTSKP43235 329 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 NXPH1P58417 271 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 IL9RQ01113 521 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 RALGDSQ12967 914 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 ACOX1Q15067 660 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 MSS51Q4VC12 460 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 LIPIQ6XZB0 460 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 KDM7AQ6ZMT4 941 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 GCNT7Q6ZNI0 430 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 PTAR1Q7Z6K3 402 aaPredicted RBP10.12□□□□□ -0.79
RFX3-210ENST00000457373 CDKL3Q8IVW4 592 aaPredicted RBP10.12□□□□□ -0.79
RFX3-210ENST00000457373 ZNF567Q8N184 647 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 TMEM145Q8NBT3 493 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 OR13H1Q8NG92 308 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 SPATA22Q8NHS9 363 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 UBE2Q2Q8WVN8 375 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 ASB12Q8WXK4 309 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 SCRN2Q96FV2 425 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 LENG8Q96PV6 779 aaPredicted RBP10.12□□□□□ -0.79
RFX3-210ENST00000457373 KLF6Q99612 283 aaPredicted RBP10.12□□□□□ -0.79
RFX3-210ENST00000457373 FERMT1Q9BQL6 677 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 RTKNQ9BST9 563 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 SLC25A51Q9H1U9 297 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 MBNL1Q9NR56 388 aaKnown RBP10.12□□□□□ -0.79
RFX3-210ENST00000457373 TM7SF3Q9NS93 570 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 PCDHB3Q9Y5E6 796 aa10.12□□□□□ -0.79
RFX3-210ENST00000457373 TDRD6O60522 2096 aaKnown RBP10.11□□□□□ -0.79
RFX3-210ENST00000457373 A0A0J9YYE9 177 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 CFAP69A5D8W1 941 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 A6NNZ2 444 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 ENC1O14682 589 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 PRLP01236 227 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 TRBC1P01850 177 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 PCCBP05166 539 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 HNF1BP35680 557 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 IGFALSP35858 605 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 SERPINB4P48594 390 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 CCDC173Q0VFZ6 552 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 ARHGEF7Q14155 803 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 GALNT3Q14435 633 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 PUM1Q14671 1186 aaKnown RBP eCLIP10.11□□□□□ -0.79
RFX3-210ENST00000457373 ZNF423Q2M1K9 1284 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 ZNF569Q5MCW4 686 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 Q6ZSR6 202 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 USP45Q70EL2 814 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 TSPAN33Q86UF1 283 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 IQCHQ86VS3 1027 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 SPATS2Q86XZ4 545 aaKnown RBP10.11□□□□□ -0.79
RFX3-210ENST00000457373 SLC13A5Q86YT5 568 aaPredicted RBP10.11□□□□□ -0.79
RFX3-210ENST00000457373 SLC35F6Q8N357 371 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 TP53I13Q8NBR0 393 aaPredicted RBP10.11□□□□□ -0.79
RFX3-210ENST00000457373 DENND6BQ8NEG7 585 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 ARMC2Q8NEN0 867 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 ZNF592Q92610 1267 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 CENPTQ96BT3 561 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 IFT43Q96FT9 208 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 IMP4Q96G21 291 aaKnown RBP10.11□□□□□ -0.79
RFX3-210ENST00000457373 VAT1Q99536 393 aa10.11□□□□□ -0.79
RFX3-210ENST00000457373 ELF4Q99607 663 aaPredicted RBP10.11□□□□□ -0.79
RFX3-210ENST00000457373 C1QTNF7Q9BXJ2 289 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms